BLASTX nr result

ID: Coptis24_contig00030285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030285
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78294.1| hypothetical protein VITISV_035517 [Vitis vinifera]    53   1e-14
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    47   2e-14
emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]    49   3e-14
emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]    49   3e-14
emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]    53   3e-14

>emb|CAN78294.1| hypothetical protein VITISV_035517 [Vitis vinifera]
          Length = 350

 Score = 52.8 bits (125), Expect(3) = 1e-14
 Identities = 22/53 (41%), Positives = 32/53 (60%)
 Frame = -1

Query: 997 AFSFSLGNGKTIRFWVDIWAADEPL*PKFPLIYQVSMLKDGTVSEFCSSEQNG 839
           + +F +GNG+ +RFW D W  DEPL   FP ++ +S  KD  VSE  + +  G
Sbjct: 63  SLAFRVGNGRRVRFWKDKWCGDEPLYESFPSLFAISQAKDAWVSEMWNPDGVG 115



 Score = 41.6 bits (96), Expect(3) = 1e-14
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
 Frame = -2

Query: 837 SWNVLLRRFSNEWEVQQSANLAVFLDSV-ILSDQSDVWCWRWTSSGVFLLSSFYCSLAEP 661
           SW  L  R  N+WE++      + + +  +     D   W  + SGVF + S Y S+ EP
Sbjct: 117 SWTPLFSRALNDWEIEMMEQFMLKIQAFRVQRVNEDKMVWTTSKSGVFSVKSLY-SILEP 175

Query: 660 NSDITCITEKFPLKLVSKVPILREDQVVVWSAVHSRTLTAESFIQRGTNFL-PCALCV 490
                  +  FP   + K  +  +     W A   + LT +   +RG +    C LC+
Sbjct: 176 GG-----SAMFPYVGIWKASVPPKVAFFAWEASWGKILTLDQLQRRGYSLANRCFLCL 228



 Score = 32.0 bits (71), Expect(3) = 1e-14
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -3

Query: 431 WNLLMQLVCDAITCIIQIVSLEEWLAIWPKIRGNGFGAKLWRLTPCAVIWAVWKTRN 261
           WNLL  L    +  ++   ++++ L  W          K W++ P  + W+VWK RN
Sbjct: 248 WNLLFSLF--GVEWVLS-GTVKDTLLGWHGAFVGKIRKKAWQMAPLCIFWSVWKERN 301


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 47.0 bits (110), Expect(3) = 2e-14
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
 Frame = -2

Query: 840  GSWNVLLRRFSNEWEVQQS-ANLAVFLDSVILSDQSDVWCWRWTSSGVFLLSSFYCSLAE 664
            G WN    R  N+WE++++   L       ++ D+ D   W  T SG+F   S Y +L  
Sbjct: 1616 GGWNPCFSRALNDWEMEEAELFLGCLHGKRVIGDEDDKVVWTETKSGIFSAKSLYLAL-- 1673

Query: 663  PNSDITCITEKFPLKLVSKVPILREDQVVVWSAVHSRTLTAESFIQRGTNFL-PCALCV 490
               +  C    FP   + KV +  +     W A   + LT +   +RG +    C +C+
Sbjct: 1674 ---EADC-PSSFPSSCIWKVWVQPKISFFAWEAAWGKALTLDLVQRRGWSLANRCYMCM 1728



 Score = 44.7 bits (104), Expect(3) = 2e-14
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = -1

Query: 991  SFSLGNGKTIRFWVDIWAADEPL*PKFPLIYQVSMLKDGTVSE 863
            SFS+GNG+ + FW D W    PL   FP IY +S+ K+  V++
Sbjct: 1563 SFSVGNGRRVSFWRDRWCGXAPLCDSFPSIYALSIEKEAWVAD 1605



 Score = 33.9 bits (76), Expect(3) = 2e-14
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = -3

Query: 431  WNLLMQL--VCDAITCIIQIVSLEEWLAIWPKIRGNGFGAKLWRLTPCAVIWAVWKTRN 261
            W LL  L  V   + C     S+ E L  W          K+WR  P  + W VWK RN
Sbjct: 1748 WELLFSLFGVSWVMPC-----SVRETLLSWQTSSVGKKHRKVWRAAPLHIFWTVWKARN 1801


>emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]
          Length = 971

 Score = 48.5 bits (114), Expect(3) = 3e-14
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
 Frame = -2

Query: 840  GSWNVLLRRFSNEWEVQQSANLAVFLDSV-ILSDQSDVWCWRWTSSGVFLLSSFYCSLAE 664
            G WN    R  N+WE++++      + S  +  D  D   W  T SG FL+ S Y +L  
Sbjct: 739  GGWNPCFLRAFNDWEIEEAKRFMERIQSKRVYEDVEDTVSWTETKSGKFLVKSLYIALEA 798

Query: 663  PNSDITCITEKFPLKLVSKVPILREDQVVVWSAVHSRTLTAESFIQRG 520
              S +      FP   +  V +  +     W A   + LT +   +RG
Sbjct: 799  GGSSL------FPSSFIWNVNVQPKMSFFAWEATWGKALTLDLVQKRG 840



 Score = 38.5 bits (88), Expect(3) = 3e-14
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = -1

Query: 991 SFSLGNGKTIRFWVDIWAADEPL*PKFPLIYQVSMLKDGTVSE 863
           +F +GNG+ + FW D W  + PL   FP ++ +++ K+  V++
Sbjct: 686 AFIVGNGRRVSFWRDRWCGESPLCMTFPSLFALTIEKEAWVAD 728



 Score = 37.7 bits (86), Expect(3) = 3e-14
 Identities = 32/99 (32%), Positives = 42/99 (42%)
 Frame = -3

Query: 431  WNLLMQLVCDAITCIIQIVSLEEWLAIWPKIRGNGFGAKLWRLTPCAVIWAVWKTRN*RF 252
            W LL  L    ++ ++   S+ E L  W          K+WR+ P  + W VWK RN R 
Sbjct: 871  WELLFALF--GVSWVLPF-SVRETLLSWNGYFLGKNRKKVWRVAPLHIFWTVWKERN-RL 926

Query: 251  SETREYMPKQ*AWESAIL*YWCSGTLAKLM*TDSPCFIA 135
            +   E +  Q    S IL  W     AKL   D P  IA
Sbjct: 927  AFKDESLSIQRLKHSFILTLWAE---AKLFIDDCPLTIA 962


>emb|CAN70922.1| hypothetical protein VITISV_016266 [Vitis vinifera]
          Length = 945

 Score = 48.5 bits (114), Expect(3) = 3e-14
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
 Frame = -2

Query: 840  GSWNVLLRRFSNEWEVQQSANLAVFLD-SVILSDQSDVWCWRWTSSGVFLLSSFYCSLAE 664
            G WN    R  N+WEV+++++    L  S ++ D  D   W  T SG F + S Y ++  
Sbjct: 713  GGWNPCFVRAFNDWEVEEASSFMERLHRSRVIEDVEDRVSWTETKSGKFSVKSLYLAIEA 772

Query: 663  PNSDITCITEKFPLKLVSKVPILREDQVVVWSAVHSRTLTAESFIQRGTNFL-PCALCV 490
              S       +FP  L+  V +        W A   + LT +   +RG      C LC+
Sbjct: 773  GGS------ARFPSSLIWNVYVQPNISFFAWEATWGKALTLDKVQKRGWALANRCFLCL 825



 Score = 43.9 bits (102), Expect(3) = 3e-14
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = -1

Query: 988 FSLGNGKTIRFWVDIWAADEPL*PKFPLIYQVSMLKDGTVSEFCSSEQNG 839
           F +GNG+ +RFW D W  D PL   FP ++ +++ K+ +V++   S   G
Sbjct: 661 FIVGNGRRVRFWRDKWCGDSPLCSSFPSLFALTVDKEESVADVWDSLAEG 710



 Score = 32.3 bits (72), Expect(3) = 3e-14
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 374 SLEEWLAIWPKIRGNGFGAKLWRLTPCAVIWAVWKTRN 261
           S++E L  W          K+WR  P  + W VWK RN
Sbjct: 861 SIKETLLSWHGSFVGKKRKKVWRAAPLHIFWTVWKARN 898


>emb|CAN78985.1| hypothetical protein VITISV_038307 [Vitis vinifera]
          Length = 489

 Score = 52.8 bits (125), Expect(3) = 3e-14
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
 Frame = -2

Query: 840 GSWNVLLRRFSNEWEVQQSANLAVFLDSVILSDQSDVWCWRWTSSGVFLLSSFYCSLAEP 661
           G W V  RR   +WE+++      ++ +V + +  D   W+    G F + S+Y SL E 
Sbjct: 148 GGWEVHFRRPFQDWELEEVNRFLGYISAVKVQEGEDFLVWKIERKGTFKIKSYYRSLKED 207

Query: 660 NSDITCITEKFPLKLV--SKVPILREDQVVVWSAVHSRTLTAESFIQRGTNFL-PCALC 493
           NS +      FP K V  S  P+    +   W AV  +  T +  ++RG + +  C LC
Sbjct: 208 NSPL------FPAKEVWGSYAPL--RTRFFAWEAVWGKISTVDMLMRRGWSMVNRCNLC 258



 Score = 41.6 bits (96), Expect(3) = 3e-14
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -1

Query: 982 LGNGKTIRFWVDIWAADEPL*PKFPLIYQVSMLKDGTVSEFCSSEQNG 839
           +GNG   RFW DIW  D  L   FPL+++++      V++    ++ G
Sbjct: 99  IGNGTRTRFWWDIWVGDSKLKDLFPLLFRIAANNSAVVADLWGRQEGG 146



 Score = 30.4 bits (67), Expect(3) = 3e-14
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -3

Query: 437 EFWNLLMQLVCDAITCIIQIVSLEEWLAIWPKIRGNGFGAK---LWRLTPCAVIWAVWKT 267
           + WNLL  L    +  ++   S+   L  W   +  G G K   +W++ P  + W +W  
Sbjct: 277 DLWNLLFSLF--GVVWVLS-ESVRNLLLEW---KMKGLGKKRSVVWKMAPICLFWCIWGE 330

Query: 266 RN*RFSETRE 237
           +N R  +  E
Sbjct: 331 QNRRIFQEEE 340


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