BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030268
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84350.1| hypothetical protein OsI_30872 [Oryza sativa Indi...   100   2e-19
ref|NP_173449.1| pentatricopeptide repeat-containing protein [Ar...    97   2e-18
ref|XP_002890375.1| pentatricopeptide repeat-containing protein ...    97   2e-18
gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indi...    97   2e-18
ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] g...    97   2e-18

>gb|EEC84350.1| hypothetical protein OsI_30872 [Oryza sativa Indica Group]
          Length = 122

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +3

Query: 3   VIKNLRICGDCHTAIKFIARFEGREIYVRDTNRFHHFKDGLCSCGDYW 146
           VIKNLRICGDCH A+KFI+ FEGREIYVRDTNRFHHFKDG CSC DYW
Sbjct: 75  VIKNLRICGDCHEAMKFISSFEGREIYVRDTNRFHHFKDGKCSCADYW 122


>ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g20230 gi|332191832|gb|AEE29953.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +3

Query: 3   VIKNLRICGDCHTAIKFIARFEGREIYVRDTNRFHHFKDGLCSCGDYW 146
           VIKNLRICGDCH  IKFI+ + GREI++RDTNRFHHFKDG+CSCGD+W
Sbjct: 713 VIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760


>ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336217|gb|EFH66634.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 760

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +3

Query: 3   VIKNLRICGDCHTAIKFIARFEGREIYVRDTNRFHHFKDGLCSCGDYW 146
           VIKNLRICGDCH  IKFI+ + GREI++RDTNRFHHFKDG+CSCGD+W
Sbjct: 713 VIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760


>gb|EAZ08599.1| hypothetical protein OsI_30870 [Oryza sativa Indica Group]
          Length = 410

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 41/48 (85%), Positives = 43/48 (89%)
 Frame = +3

Query: 3   VIKNLRICGDCHTAIKFIARFEGREIYVRDTNRFHHFKDGLCSCGDYW 146
           VIKNLRICGDCH A+KFI+ FE REIYVRDTNRFHHFKDG CSC DYW
Sbjct: 363 VIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 410


>ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
           gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578900|dbj|BAF17263.1|
           Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 41/48 (85%), Positives = 43/48 (89%)
 Frame = +3

Query: 3   VIKNLRICGDCHTAIKFIARFEGREIYVRDTNRFHHFKDGLCSCGDYW 146
           VIKNLRICGDCH A+KFI+ FE REIYVRDTNRFHHFKDG CSC DYW
Sbjct: 617 VIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664