BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030267
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,...   170   3e-40
ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containi...   157   1e-36
ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
emb|CBI25186.3| unnamed protein product [Vitis vinifera]              156   3e-36

>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  171 bits (433), Expect = 1e-40
 Identities = 84/148 (56%), Positives = 109/148 (73%)
 Frame = -3

Query: 448 SETEAMDFLDKVEEGVQLDCSLVCSVVWALRNEWELALLGFKWGQKLGCIDSSAWDLMVL 269
           SE EAM  LD  E G++ + +LV SV+W LR EW LA L FKWG K GC+D  A +LMV 
Sbjct: 7   SEAEAMASLD--ESGIRANQNLVYSVIWELREEWRLAFLAFKWGDKWGCVDEKACELMVW 64

Query: 268 VLGQNKRFGTAWCLIRNMHRSSLNVRRALLIMIECYAVADCPGKSIQTFKAMEKFRISQD 89
           VLG +++F TAW LIR++HRS ++ R+A+LIMI+ YA A+ PGK+I  F+ M+KFR++ D
Sbjct: 65  VLGNHRKFNTAWILIRDLHRSLMSTRKAMLIMIDRYAAANVPGKAIYAFRIMDKFRMTPD 124

Query: 88  SKALDTLLHSLCKNGNIEEAEEFMQQNK 5
            +A   LL+ LCKNGNIEEAEEFM  NK
Sbjct: 125 EEAFYFLLNVLCKNGNIEEAEEFMLVNK 152


>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 552

 Score =  170 bits (430), Expect = 3e-40
 Identities = 90/210 (42%), Positives = 134/210 (63%), Gaps = 5/210 (2%)
 Frame = -3

Query: 619 FSATDHQSFIPPSSSRTQFFKHHLFPLKPSTFNLEL-ELDQTNHSTL----VETLRKTKE 455
           F A  H++   P  +  +F     F  +   +  EL E    NH  L    +ETL++   
Sbjct: 44  FYAAFHRTASVPFLNSLRFSGSQSFSSQNQKYPFELFEHRIYNHDPLTQGLLETLKRAAY 103

Query: 454 FTSETEAMDFLDKVEEGVQLDCSLVCSVVWALRNEWELALLGFKWGQKLGCIDSSAWDLM 275
           F  E EAM  +D    GV+ + +LV SV+W LR +W+LA LGFKWG+K GCID  + +L+
Sbjct: 104 FPGEAEAMACIDG--SGVKANINLVYSVIWELRKDWKLAFLGFKWGEKWGCIDEKSCELI 161

Query: 274 VLVLGQNKRFGTAWCLIRNMHRSSLNVRRALLIMIECYAVADCPGKSIQTFKAMEKFRIS 95
           V +LG +++F  AW +IR+MH+ S+N+++ +LIMI+ YA AD PGK+I+ F  MEKF+++
Sbjct: 162 VWILGNHRKFNNAWIVIRDMHQLSMNIQQTMLIMIDRYAAADNPGKAIEVFNIMEKFKMA 221

Query: 94  QDSKALDTLLHSLCKNGNIEEAEEFMQQNK 5
            D +A  +L+++LC +G IEEAEEFM  NK
Sbjct: 222 PDEEAFYSLMNALCNHGYIEEAEEFMVVNK 251


>ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
           gi|449509164|ref|XP_004163514.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Cucumis sativus]
          Length = 547

 Score =  157 bits (398), Expect = 1e-36
 Identities = 79/163 (48%), Positives = 111/163 (68%)
 Frame = -3

Query: 493 HSTLVETLRKTKEFTSETEAMDFLDKVEEGVQLDCSLVCSVVWALRNEWELALLGFKWGQ 314
           ++  +E  ++     SE EA+  LD+ +  V+ D  LV S +W LR++W+ +LL FKWG+
Sbjct: 83  NARFIELFKRVALLPSEVEAVAALDEFD--VKADLDLVYSAIWVLRDDWKSSLLAFKWGE 140

Query: 313 KLGCIDSSAWDLMVLVLGQNKRFGTAWCLIRNMHRSSLNVRRALLIMIECYAVADCPGKS 134
           K+G ID    +LM+ VLG +K+F TAW LIR +H S LN  +A+L+MI+ YA A+   K+
Sbjct: 141 KVGAIDEEICNLMIWVLGNHKKFSTAWSLIRELHGSLLNSMQAMLVMIDRYAYANEASKA 200

Query: 133 IQTFKAMEKFRISQDSKALDTLLHSLCKNGNIEEAEEFMQQNK 5
           I+TF  MEKFR++ D +A   LL+SLCK GNIEEAEEFM  NK
Sbjct: 201 IKTFHMMEKFRLTPDQEAFHVLLNSLCKYGNIEEAEEFMFVNK 243


>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Vitis vinifera]
          Length = 537

 Score =  156 bits (395), Expect = 3e-36
 Identities = 80/162 (49%), Positives = 107/162 (66%)
 Frame = -3

Query: 490 STLVETLRKTKEFTSETEAMDFLDKVEEGVQLDCSLVCSVVWALRNEWELALLGFKWGQK 311
           S L E L++ +  +SE E M  LD    GV+ +  LV   +W LR +W LA   F WG+K
Sbjct: 80  SGLPELLKRLEGLSSEAEVMAVLDG--SGVEPNQELVYWAIWGLREDWRLAYWVFNWGEK 137

Query: 310 LGCIDSSAWDLMVLVLGQNKRFGTAWCLIRNMHRSSLNVRRALLIMIECYAVADCPGKSI 131
            GC       L++ +LG  K+FG AWCLIR +HRSS++ RRA+LIMI+ Y  A+ P K+I
Sbjct: 138 WGCNSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAI 197

Query: 130 QTFKAMEKFRISQDSKALDTLLHSLCKNGNIEEAEEFMQQNK 5
           +TF  MEKFR+S D +A  TLL +LCK+GN+E+AEE M QNK
Sbjct: 198 KTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNK 239


>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  156 bits (395), Expect = 3e-36
 Identities = 80/162 (49%), Positives = 107/162 (66%)
 Frame = -3

Query: 490 STLVETLRKTKEFTSETEAMDFLDKVEEGVQLDCSLVCSVVWALRNEWELALLGFKWGQK 311
           S L E L++ +  +SE E M  LD    GV+ +  LV   +W LR +W LA   F WG+K
Sbjct: 80  SGLPELLKRLEGLSSEAEVMAVLDG--SGVEPNQELVYWAIWGLREDWRLAYWVFNWGEK 137

Query: 310 LGCIDSSAWDLMVLVLGQNKRFGTAWCLIRNMHRSSLNVRRALLIMIECYAVADCPGKSI 131
            GC       L++ +LG  K+FG AWCLIR +HRSS++ RRA+LIMI+ Y  A+ P K+I
Sbjct: 138 WGCNSERTRGLVIWILGNCKKFGVAWCLIRELHRSSVDTRRAMLIMIDRYTAANDPCKAI 197

Query: 130 QTFKAMEKFRISQDSKALDTLLHSLCKNGNIEEAEEFMQQNK 5
           +TF  MEKFR+S D +A  TLL +LCK+GN+E+AEE M QNK
Sbjct: 198 KTFHIMEKFRLSPDQEAFYTLLTALCKHGNVEDAEELMFQNK 239