BLASTX nr result

ID: Coptis24_contig00030263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030263
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002532700.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
emb|CBI37896.3| unnamed protein product [Vitis vinifera]               60   1e-07
gb|AFK47882.1| unknown [Lotus japonicus]                               60   2e-07
ref|XP_003634877.1| PREDICTED: uncharacterized protein LOC100264...    57   2e-06

>ref|XP_002305504.1| predicted protein [Populus trichocarpa] gi|222848468|gb|EEE86015.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/98 (29%), Positives = 56/98 (57%)
 Frame = +2

Query: 2   WSPMMDDILIRVLLEKSLNGTGRTSRNRFDLGTLKEAAKVLNQRFNLSIESVHVYQRIKI 181
           W+P  D  L+ + +++  +  GRT+ N F    ++   +  N+RF++++E   V  R  +
Sbjct: 16  WTPTRDAYLVELFIDQ--HNCGRTAYNEFKNEMIRSVTRDFNKRFSMNLEESQVKNRYNV 73

Query: 182 IKKDYNTIKQLIDTTEFGFTYNQHTKFIEADRQTWDAY 295
           +KKDY  +K L+  T  GF +++  + + AD + WD+Y
Sbjct: 74  MKKDYGVVKTLL--THSGFGWDESRQMVVADDKVWDSY 109


>ref|XP_002532700.1| conserved hypothetical protein [Ricinus communis]
           gi|223527567|gb|EEF29685.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/98 (28%), Positives = 54/98 (55%)
 Frame = +2

Query: 2   WSPMMDDILIRVLLEKSLNGTGRTSRNRFDLGTLKEAAKVLNQRFNLSIESVHVYQRIKI 181
           W+P  D  L+ + +E+  +  GRT+ N F    +K   +  N+ F +++E   +  R  +
Sbjct: 16  WTPTRDAYLVELFIEQ--HNCGRTAYNEFKNEVIKSVTRDFNKNFGMNLEENQIKNRYNV 73

Query: 182 IKKDYNTIKQLIDTTEFGFTYNQHTKFIEADRQTWDAY 295
           +KKDY  +K L+  +  GF +++  + + AD + WD+Y
Sbjct: 74  MKKDYGVVKTLL--SHSGFRWDETRQMVVADDKVWDSY 109


>emb|CBI37896.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/98 (28%), Positives = 53/98 (54%)
 Frame = +2

Query: 2   WSPMMDDILIRVLLEKSLNGTGRTSRNRFDLGTLKEAAKVLNQRFNLSIESVHVYQRIKI 181
           W+P  D  L+ + +E+  +  GRT+ N F +   K      N++F +++E   +  R  +
Sbjct: 16  WTPSRDAYLVELFIEQ--HNCGRTAYNEFKVEVYKSVTNDFNRKFGMNLEENQIKNRYNV 73

Query: 182 IKKDYNTIKQLIDTTEFGFTYNQHTKFIEADRQTWDAY 295
           +KKDY  +K L+  +  GF ++   + + AD + WD+Y
Sbjct: 74  MKKDYGIVKTLL--SHPGFAWDDIRQMVVADDKIWDSY 109


>gb|AFK47882.1| unknown [Lotus japonicus]
          Length = 293

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/98 (28%), Positives = 54/98 (55%)
 Frame = +2

Query: 2   WSPMMDDILIRVLLEKSLNGTGRTSRNRFDLGTLKEAAKVLNQRFNLSIESVHVYQRIKI 181
           W+P  D  ++ +L+E+  + +GRT+ N F    +K      N++F L++E   +  R  +
Sbjct: 16  WTPTRDAYMVELLIEQ--HKSGRTAYNEFKNEVIKSVTWDFNKKFGLNLEENQIKNRYNV 73

Query: 182 IKKDYNTIKQLIDTTEFGFTYNQHTKFIEADRQTWDAY 295
           +KKDY  +K L+   E  F +++  + + AD + W+ Y
Sbjct: 74  MKKDYGVVKTLLSHKE--FAWDETRRMVVADDKVWENY 109


>ref|XP_003634877.1| PREDICTED: uncharacterized protein LOC100264359 isoform 2 [Vitis
           vinifera]
          Length = 294

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = +2

Query: 2   WSPMMDDILIRVLLEKSLNGTGRTSRNRFDLGTLKEAAKVLNQRFNLSIESVHVYQRIKI 181
           WS  MD  LI  L+ ++ NG        F+      A   +N RFNL++ +  V  R+K 
Sbjct: 10  WSMAMDKCLIEALVIQAKNGN--KIDKCFNENAYTAACIAVNSRFNLNLNNQKVVNRLKT 67

Query: 182 IKKDYNTIKQLIDTTEFGFTYNQHTKFIEADR-QTWDAY 295
           IKK Y  ++ ++  T+ GFT+N +TK IE D    W  Y
Sbjct: 68  IKKRYKIMRDML--TQNGFTWNPNTKMIECDNDDLWKRY 104


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