BLASTX nr result

ID: Coptis24_contig00030251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030251
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60104.1| hypothetical protein VITISV_017979 [Vitis vinifera]    85   7e-15
ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v...    84   9e-15
ref|XP_003602055.1| Metal transporter [Medicago truncatula] gi|3...    84   1e-14
ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cu...    80   1e-13

>emb|CAN60104.1| hypothetical protein VITISV_017979 [Vitis vinifera]
          Length = 1091

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
 Frame = -2

Query: 217 MGSQLQPQEAIGSRRIASLDVEIKNTPSTI--HQD-DDQRTGWRKFLSHVGPGFLVSLAY 47
           MGS        GS+RIA+LD     + S    H D DDQ+ GWRKFL+ VGPGFLVSLAY
Sbjct: 1   MGSLEHQVXNTGSKRIAALDTPPPPSRSHAAHHLDLDDQKPGWRKFLAFVGPGFLVSLAY 60

Query: 46  LDPGNLETDLQAGAN 2
           LDPGNLETDLQAGAN
Sbjct: 61  LDPGNLETDLQAGAN 75


>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
           gi|302141782|emb|CBI18985.3| unnamed protein product
           [Vitis vinifera]
          Length = 542

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
 Frame = -2

Query: 217 MGSQLQPQEAIGSRRIASLDVEIKNTPSTI--HQD-DDQRTGWRKFLSHVGPGFLVSLAY 47
           MGS        GS+RIA+LD     + S    H D DDQ+ GWRKFL+ VGPGFLVSLAY
Sbjct: 1   MGSLEHQVGNTGSKRIAALDTPPPPSRSHAAHHLDLDDQKPGWRKFLAFVGPGFLVSLAY 60

Query: 46  LDPGNLETDLQAGAN 2
           LDPGNLETDLQAGAN
Sbjct: 61  LDPGNLETDLQAGAN 75


>ref|XP_003602055.1| Metal transporter [Medicago truncatula]
           gi|357520337|ref|XP_003630457.1| Metal transporter
           [Medicago truncatula] gi|355491103|gb|AES72306.1| Metal
           transporter [Medicago truncatula]
           gi|355524479|gb|AET04933.1| Metal transporter [Medicago
           truncatula]
          Length = 542

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 3/63 (4%)
 Frame = -2

Query: 181 SRRIASLDVEIKNTPSTIHQDD---DQRTGWRKFLSHVGPGFLVSLAYLDPGNLETDLQA 11
           + RI +++V   +TPS  H D    DQ+ GW+KFL++VGPGFLVSLAYLDPGN+ETDLQA
Sbjct: 11  NNRIVAVNVTPSSTPSYNHDDSSKQDQKPGWKKFLAYVGPGFLVSLAYLDPGNMETDLQA 70

Query: 10  GAN 2
           GAN
Sbjct: 71  GAN 73


>ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1|
           nramp transporter [Populus trichocarpa]
          Length = 585

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
 Frame = -2

Query: 181 SRRIASLDVEIKNTPST----IHQDDDQRTGWRKFLSHVGPGFLVSLAYLDPGNLETDLQ 14
           S RIAS++VE +  P      +   + Q+ GWRKFLS+VGPGFLVSLAYLDPGNLETDLQ
Sbjct: 22  SNRIASVNVEGQPQPWADDLDLQDPNHQKPGWRKFLSYVGPGFLVSLAYLDPGNLETDLQ 81

Query: 13  AGAN 2
           AGAN
Sbjct: 82  AGAN 85


>ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus]
           gi|449499093|ref|XP_004160719.1| PREDICTED: metal
           transporter Nramp5-like [Cucumis sativus]
          Length = 549

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 9/82 (10%)
 Frame = -2

Query: 220 EMGSQLQPQEAIGSRRIASLDVEIKNTPSTI-----HQDDD----QRTGWRKFLSHVGPG 68
           +M +   P    GS RIA++++    TP+       HQ+      Q+ GWRKFLS+VGPG
Sbjct: 4   QMSTAATPSFGGGSNRIAAVNI---TTPTNALKPQNHQEGKNTTHQKPGWRKFLSYVGPG 60

Query: 67  FLVSLAYLDPGNLETDLQAGAN 2
           FLVSLAYLDPGNLETDLQAGAN
Sbjct: 61  FLVSLAYLDPGNLETDLQAGAN 82


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