BLASTX nr result
ID: Coptis24_contig00030251
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030251 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN60104.1| hypothetical protein VITISV_017979 [Vitis vinifera] 85 7e-15 ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v... 84 9e-15 ref|XP_003602055.1| Metal transporter [Medicago truncatula] gi|3... 84 1e-14 ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2... 81 8e-14 ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cu... 80 1e-13 >emb|CAN60104.1| hypothetical protein VITISV_017979 [Vitis vinifera] Length = 1091 Score = 84.7 bits (208), Expect = 7e-15 Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 3/75 (4%) Frame = -2 Query: 217 MGSQLQPQEAIGSRRIASLDVEIKNTPSTI--HQD-DDQRTGWRKFLSHVGPGFLVSLAY 47 MGS GS+RIA+LD + S H D DDQ+ GWRKFL+ VGPGFLVSLAY Sbjct: 1 MGSLEHQVXNTGSKRIAALDTPPPPSRSHAAHHLDLDDQKPGWRKFLAFVGPGFLVSLAY 60 Query: 46 LDPGNLETDLQAGAN 2 LDPGNLETDLQAGAN Sbjct: 61 LDPGNLETDLQAGAN 75 >ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera] gi|302141782|emb|CBI18985.3| unnamed protein product [Vitis vinifera] Length = 542 Score = 84.3 bits (207), Expect = 9e-15 Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 3/75 (4%) Frame = -2 Query: 217 MGSQLQPQEAIGSRRIASLDVEIKNTPSTI--HQD-DDQRTGWRKFLSHVGPGFLVSLAY 47 MGS GS+RIA+LD + S H D DDQ+ GWRKFL+ VGPGFLVSLAY Sbjct: 1 MGSLEHQVGNTGSKRIAALDTPPPPSRSHAAHHLDLDDQKPGWRKFLAFVGPGFLVSLAY 60 Query: 46 LDPGNLETDLQAGAN 2 LDPGNLETDLQAGAN Sbjct: 61 LDPGNLETDLQAGAN 75 >ref|XP_003602055.1| Metal transporter [Medicago truncatula] gi|357520337|ref|XP_003630457.1| Metal transporter [Medicago truncatula] gi|355491103|gb|AES72306.1| Metal transporter [Medicago truncatula] gi|355524479|gb|AET04933.1| Metal transporter [Medicago truncatula] Length = 542 Score = 84.0 bits (206), Expect = 1e-14 Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 3/63 (4%) Frame = -2 Query: 181 SRRIASLDVEIKNTPSTIHQDD---DQRTGWRKFLSHVGPGFLVSLAYLDPGNLETDLQA 11 + RI +++V +TPS H D DQ+ GW+KFL++VGPGFLVSLAYLDPGN+ETDLQA Sbjct: 11 NNRIVAVNVTPSSTPSYNHDDSSKQDQKPGWKKFLAYVGPGFLVSLAYLDPGNMETDLQA 70 Query: 10 GAN 2 GAN Sbjct: 71 GAN 73 >ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1| nramp transporter [Populus trichocarpa] Length = 585 Score = 81.3 bits (199), Expect = 8e-14 Identities = 42/64 (65%), Positives = 49/64 (76%), Gaps = 4/64 (6%) Frame = -2 Query: 181 SRRIASLDVEIKNTPST----IHQDDDQRTGWRKFLSHVGPGFLVSLAYLDPGNLETDLQ 14 S RIAS++VE + P + + Q+ GWRKFLS+VGPGFLVSLAYLDPGNLETDLQ Sbjct: 22 SNRIASVNVEGQPQPWADDLDLQDPNHQKPGWRKFLSYVGPGFLVSLAYLDPGNLETDLQ 81 Query: 13 AGAN 2 AGAN Sbjct: 82 AGAN 85 >ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus] gi|449499093|ref|XP_004160719.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus] Length = 549 Score = 80.5 bits (197), Expect = 1e-13 Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 9/82 (10%) Frame = -2 Query: 220 EMGSQLQPQEAIGSRRIASLDVEIKNTPSTI-----HQDDD----QRTGWRKFLSHVGPG 68 +M + P GS RIA++++ TP+ HQ+ Q+ GWRKFLS+VGPG Sbjct: 4 QMSTAATPSFGGGSNRIAAVNI---TTPTNALKPQNHQEGKNTTHQKPGWRKFLSYVGPG 60 Query: 67 FLVSLAYLDPGNLETDLQAGAN 2 FLVSLAYLDPGNLETDLQAGAN Sbjct: 61 FLVSLAYLDPGNLETDLQAGAN 82