BLASTX nr result

ID: Coptis24_contig00030237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030237
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062278.1| Os08g0522100 [Oryza sativa Japonica Group] g...    85   7e-15
dbj|BAC55632.1| helicase-like protein [Oryza sativa Japonica Gro...    84   2e-14
gb|ABA95256.2| helicase, putative [Oryza sativa Japonica Group]        84   2e-14
gb|EEE54408.1| hypothetical protein OsJ_01437 [Oryza sativa Japo...    82   6e-14
gb|EAY83967.1| hypothetical protein OsI_39191 [Oryza sativa Indi...    81   1e-13

>ref|NP_001062278.1| Os08g0522100 [Oryza sativa Japonica Group]
           gi|113624247|dbj|BAF24192.1| Os08g0522100 [Oryza sativa
           Japonica Group]
          Length = 1578

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = +1

Query: 58  FHFYIKAHGLLEDDSEWDDAMEEASHWQVPKSLRQLFVTLILFCGVTYPEKLWEKHQKHL 237
           F    +A GLL DD EW  A+ +A HW +P  LRQLFVT++LFC VT P++L+ +H +H+
Sbjct: 495 FRAACEALGLLGDDQEWSHALNDAVHWALPYQLRQLFVTILLFCEVTNPQRLFTEHAQHM 554

Query: 238 GEDTLFRYRKKNN-NENLQLTE 300
            ED  FRYR   N ++ LQLTE
Sbjct: 555 SED--FRYRTNQNLSQILQLTE 574


>dbj|BAC55632.1| helicase-like protein [Oryza sativa Japonica Group]
            gi|42409190|dbj|BAD10456.1| helicase-like protein [Oryza
            sativa Japonica Group]
          Length = 1330

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
 Frame = +1

Query: 58   FHFYIKAHGLLEDDSEWDDAMEEASHWQVPKSLRQLFVTLILFCGVTYPEKLWEKHQKHL 237
            F    +A GLL DD EW  A+ +A HW +P  LRQLFVT++LFC VT P++L+ +H +H+
Sbjct: 753  FRAACEALGLLGDDQEWSHALNDAVHWALPYQLRQLFVTILLFCEVTNPQRLFTEHAQHM 812

Query: 238  GEDTLFRYRKKNN--NENLQLTEEHIRNETLCEIE 336
             ED  FRYR   N    N    +  + N  L E++
Sbjct: 813  SED--FRYRTNQNLSQSNSSFADSFVGNALLFELD 845


>gb|ABA95256.2| helicase, putative [Oryza sativa Japonica Group]
          Length = 1643

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
 Frame = +1

Query: 58  FHFYIKAHGLLEDDSEWDDAMEEASHWQVPKSLRQLFVTLILFCGVTYPEKLWEKHQKHL 237
           F    +A GLL DD EW  A+ +A+ W +P  LRQLFVT++LFC VT P++L+ +H +H+
Sbjct: 721 FRAACEALGLLGDDQEWSHALNDAAQWALPYQLRQLFVTILLFCEVTNPQRLFTEHAQHM 780

Query: 238 GEDTLFRYRKKNN--NENLQLTEEHIRNETLCEIE 336
            ED  FRYR   N    N   T+  + N  L E++
Sbjct: 781 SED--FRYRTNQNLSQSNSSFTDSFVGNALLFELD 813


>gb|EEE54408.1| hypothetical protein OsJ_01437 [Oryza sativa Japonica Group]
          Length = 593

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/93 (40%), Positives = 58/93 (62%)
 Frame = +1

Query: 58  FHFYIKAHGLLEDDSEWDDAMEEASHWQVPKSLRQLFVTLILFCGVTYPEKLWEKHQKHL 237
           F    +A GLL DD EW  A+ +A+ W +P  LRQLFV ++LFC V+ P KL++ H + +
Sbjct: 424 FQSACEAMGLLGDDHEWSHAITDAAQWALPYQLRQLFVMMLLFCQVSDPAKLFDNHVQLM 483

Query: 238 GEDTLFRYRKKNNNENLQLTEEHIRNETLCEIE 336
           GED  +R  +     +  + +EHIR+ TL E++
Sbjct: 484 GEDFAYRVSQHTPGIHQTIIQEHIRSSTLAELD 516


>gb|EAY83967.1| hypothetical protein OsI_39191 [Oryza sativa Indica Group]
          Length = 161

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/93 (44%), Positives = 57/93 (61%)
 Frame = +1

Query: 58  FHFYIKAHGLLEDDSEWDDAMEEASHWQVPKSLRQLFVTLILFCGVTYPEKLWEKHQKHL 237
           F    +A GLL DD EW +AM +A+ W +P  L QLFVTL+LFC VT P KL E + K +
Sbjct: 9   FRAACQALGLLGDDCEWSNAMADAAQWALPYQLHQLFVTLLLFCEVTDPIKLLEDYIKPM 68

Query: 238 GEDTLFRYRKKNNNENLQLTEEHIRNETLCEIE 336
           GED  +R  +     +  L ++HIR+  L E++
Sbjct: 69  GEDLAYRTIRPTQGISQPLVQQHIRSYVLDELD 101


Top