BLASTX nr result

ID: Coptis24_contig00030235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030235
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513848.1| KOM, putative [Ricinus communis] gi|22354693...   144   7e-33
ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein ...   143   1e-32
emb|CBI19096.3| unnamed protein product [Vitis vinifera]              143   1e-32
emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]   143   1e-32
ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like ...   140   8e-32

>ref|XP_002513848.1| KOM, putative [Ricinus communis] gi|223546934|gb|EEF48431.1| KOM,
           putative [Ricinus communis]
          Length = 389

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/107 (63%), Positives = 89/107 (83%)
 Frame = +1

Query: 43  TRFFGSRLKRKENTWVISLFVMINLVVFVSTMIVNDCPRNSKGDCVLAAIGRVSFQPLSE 222
           T FF SR  R+ +TW+IS+FV+I+L  F++TMIVNDC  NS GDC +  +GR+SFQPLSE
Sbjct: 43  TPFFKSR--RRRDTWLISIFVIIHLGAFIATMIVNDCSTNSYGDCAIKTLGRLSFQPLSE 100

Query: 223 NPFLGPSSSTLDKLGALQRKLLIQQHQMWRLFTSPWLHAGIINLVIN 363
           NP LGPS+STLDK+GAL+R L+I +HQ WRLF+ PWLHAG+I+L+I+
Sbjct: 101 NPLLGPSASTLDKMGALRRTLVI-EHQTWRLFSCPWLHAGLIHLIID 146


>ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein AN10929-like [Vitis
           vinifera]
          Length = 379

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/118 (55%), Positives = 88/118 (74%)
 Frame = +1

Query: 10  DQIDESLPKYTTRFFGSRLKRKENTWVISLFVMINLVVFVSTMIVNDCPRNSKGDCVLAA 189
           D  D+ + +   RFF S  +++E++WVISLFV++++V F +TM VNDC +NS  DC +  
Sbjct: 19  DAGDDQVLEQQVRFFKSGTRKREDSWVISLFVVLHIVAFAATMFVNDCWQNSHRDCAIKV 78

Query: 190 IGRVSFQPLSENPFLGPSSSTLDKLGALQRKLLIQQHQMWRLFTSPWLHAGIINLVIN 363
           +GR+SFQPL ENP LGPSSSTLD++GALQ+  L   HQ WRLFT  WLHAG I+L+IN
Sbjct: 79  LGRLSFQPLWENPLLGPSSSTLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIIN 136


>emb|CBI19096.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/118 (55%), Positives = 88/118 (74%)
 Frame = +1

Query: 10  DQIDESLPKYTTRFFGSRLKRKENTWVISLFVMINLVVFVSTMIVNDCPRNSKGDCVLAA 189
           D  D+ + +   RFF S  +++E++WVISLFV++++V F +TM VNDC +NS  DC +  
Sbjct: 19  DAGDDQVLEQQVRFFKSGTRKREDSWVISLFVVLHIVAFAATMFVNDCWQNSHRDCAIKV 78

Query: 190 IGRVSFQPLSENPFLGPSSSTLDKLGALQRKLLIQQHQMWRLFTSPWLHAGIINLVIN 363
           +GR+SFQPL ENP LGPSSSTLD++GALQ+  L   HQ WRLFT  WLHAG I+L+IN
Sbjct: 79  LGRLSFQPLWENPLLGPSSSTLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIIN 136


>emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]
          Length = 448

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/118 (55%), Positives = 88/118 (74%)
 Frame = +1

Query: 10  DQIDESLPKYTTRFFGSRLKRKENTWVISLFVMINLVVFVSTMIVNDCPRNSKGDCVLAA 189
           D  D+ + +   RFF S  +++E++WVISLFV++++V F +TM VNDC +NS  DC +  
Sbjct: 19  DAGDDQVLEQQVRFFKSGTRKREDSWVISLFVVLHIVAFAATMFVNDCWQNSHRDCAIKV 78

Query: 190 IGRVSFQPLSENPFLGPSSSTLDKLGALQRKLLIQQHQMWRLFTSPWLHAGIINLVIN 363
           +GR+SFQPL ENP LGPSSSTLD++GALQ+  L   HQ WRLFT  WLHAG I+L+IN
Sbjct: 79  LGRLSFQPLWENPLLGPSSSTLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIIN 136


>ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 373

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/115 (57%), Positives = 88/115 (76%)
 Frame = +1

Query: 19  DESLPKYTTRFFGSRLKRKENTWVISLFVMINLVVFVSTMIVNDCPRNSKGDCVLAAIGR 198
           D+ +P   +R  G R  R+ +TWV+S+FV+I + VF++TM+VNDC  NS GDCVL A+GR
Sbjct: 17  DQRIPLMRSRRGGRR--RRGDTWVVSVFVIIQIGVFIATMLVNDCWNNSHGDCVLQALGR 74

Query: 199 VSFQPLSENPFLGPSSSTLDKLGALQRKLLIQQHQMWRLFTSPWLHAGIINLVIN 363
            SFQPL ENP LGPS S LD++GAL+R LL + HQ WRLFT P+LHAG+ +L++N
Sbjct: 75  FSFQPLPENPLLGPSQSKLDEMGALRRSLLTEHHQTWRLFTFPFLHAGVFHLLLN 129


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