BLASTX nr result

ID: Coptis24_contig00030218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030218
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associat...   107   3e-33
ref|XP_003521780.1| PREDICTED: vacuolar protein sorting-associat...   106   3e-33
ref|XP_002519583.1| Vacuolar protein sorting protein, putative [...   107   2e-32
ref|XP_003554727.1| PREDICTED: vacuolar protein sorting-associat...   104   3e-32
ref|XP_003590925.1| Vacuolar protein sorting-associated protein-...   106   3e-32

>ref|XP_002276491.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Vitis vinifera] gi|297737982|emb|CBI27183.3| unnamed
           protein product [Vitis vinifera]
          Length = 707

 Score =  107 bits (268), Expect(2) = 3e-33
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = +1

Query: 133 KSSTKAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGA 312
           K   KAVSKVF+FI+QK+Y+L K K N QI  QSV+ KYKY + FLKEHG EVYI+VR A
Sbjct: 221 KLRQKAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEVYIEVRAA 280

Query: 313 YIDTMNKVLSARSRDYIQAL 372
           YIDTMNKVLSA  R YIQAL
Sbjct: 281 YIDTMNKVLSAHFRAYIQAL 300



 Score = 58.9 bits (141), Expect(2) = 3e-33
 Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +2

Query: 17  DVNNEYMKRLEILSTKLKLVVVDPMVRSS-TLKDIQPRLESLRQK 148
           +VN EYM+ LEILS KLK V V+PMV++S  LKD+QP LE LRQK
Sbjct: 181 EVNEEYMRTLEILSKKLKFVEVEPMVKTSKALKDVQPELEKLRQK 225


>ref|XP_003521780.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Glycine max]
          Length = 707

 Score =  106 bits (264), Expect(2) = 3e-33
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = +1

Query: 133 KSSTKAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGA 312
           K   KAVSKVFDFI+QK+Y+L K K N QI  QSV+ KYKY + FLKEHG E+Y +VR A
Sbjct: 221 KLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEIYNEVRAA 280

Query: 313 YIDTMNKVLSARSRDYIQAL 372
           YIDTMNKVLSA  R YIQAL
Sbjct: 281 YIDTMNKVLSAHFRAYIQAL 300



 Score = 60.5 bits (145), Expect(2) = 3e-33
 Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +2

Query: 17  DVNNEYMKRLEILSTKLKLVVVDPMVRSS-TLKDIQPRLESLRQK 148
           +VN EYM+ LEILS KLK V VDPMV++S  LKD+QP LE LRQK
Sbjct: 181 EVNEEYMRTLEILSKKLKFVEVDPMVKASKALKDVQPELEKLRQK 225


>ref|XP_002519583.1| Vacuolar protein sorting protein, putative [Ricinus communis]
           gi|223541241|gb|EEF42794.1| Vacuolar protein sorting
           protein, putative [Ricinus communis]
          Length = 713

 Score =  107 bits (266), Expect(2) = 2e-32
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = +1

Query: 133 KSSTKAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGA 312
           K   KAVSKVF+FI+QK+Y+L K K N QI  QSV+ KYKY I FLKEHG E+YI+VR A
Sbjct: 227 KLRQKAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVISFLKEHGKEIYIEVRTA 286

Query: 313 YIDTMNKVLSARSRDYIQAL 372
           YIDTMNKVLSA  R YIQAL
Sbjct: 287 YIDTMNKVLSAHFRAYIQAL 306



 Score = 57.0 bits (136), Expect(2) = 2e-32
 Identities = 28/45 (62%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +2

Query: 17  DVNNEYMKRLEILSTKLKLVVVDPMVR-SSTLKDIQPRLESLRQK 148
           +VN+EY++ LEILS KLK V VDP+V+ +  LKD+QP LE LRQK
Sbjct: 187 EVNDEYLRTLEILSKKLKFVEVDPLVKGAKALKDVQPELEKLRQK 231


>ref|XP_003554727.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Glycine max]
          Length = 707

 Score =  104 bits (259), Expect(2) = 3e-32
 Identities = 54/80 (67%), Positives = 61/80 (76%)
 Frame = +1

Query: 133 KSSTKAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGA 312
           K   KAVSKVFDFI+QK+Y+L K K N QI  QSV+ KYKY + FLKEHG E+Y +V  A
Sbjct: 221 KLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEIYNEVHAA 280

Query: 313 YIDTMNKVLSARSRDYIQAL 372
           YIDTMNKVLSA  R YIQAL
Sbjct: 281 YIDTMNKVLSAHFRAYIQAL 300



 Score = 59.3 bits (142), Expect(2) = 3e-32
 Identities = 29/45 (64%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +2

Query: 17  DVNNEYMKRLEILSTKLKLVVVDPMVRSS-TLKDIQPRLESLRQK 148
           +VN EYM+ +E+LS KLK V VDPMV++S  LKD+QP LE LRQK
Sbjct: 181 EVNEEYMRTIEVLSKKLKFVEVDPMVKASKALKDVQPELEKLRQK 225


>ref|XP_003590925.1| Vacuolar protein sorting-associated protein-like protein [Medicago
           truncatula] gi|355479973|gb|AES61176.1| Vacuolar protein
           sorting-associated protein-like protein [Medicago
           truncatula]
          Length = 699

 Score =  106 bits (264), Expect(2) = 3e-32
 Identities = 56/80 (70%), Positives = 62/80 (77%)
 Frame = +1

Query: 133 KSSTKAVSKVFDFIIQKIYSLGKLKINNQIHLQSVISKYKYAILFLKEHGNEVYIKVRGA 312
           K   KAVSKVFDFI+QK+Y+L K K N QI  QSV+ KYKY + FLKEHG EVY +VR A
Sbjct: 212 KLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVNFLKEHGKEVYNEVRAA 271

Query: 313 YIDTMNKVLSARSRDYIQAL 372
           YIDTMNKVLSA  R YIQAL
Sbjct: 272 YIDTMNKVLSAHFRAYIQAL 291



 Score = 57.4 bits (137), Expect(2) = 3e-32
 Identities = 30/45 (66%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = +2

Query: 17  DVNNEYMKRLEILSTKLKLVVVDPMVRSS-TLKDIQPRLESLRQK 148
           +VN EYM+ LEILS KLK V VD MV++S  LKD+QP LE LRQK
Sbjct: 172 EVNEEYMRTLEILSKKLKFVEVDTMVKASKALKDVQPELEKLRQK 216


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