BLASTX nr result
ID: Coptis24_contig00030208
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030208 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 1... 177 8e-43 emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypo... 176 2e-42 gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta] 176 2e-42 dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng] 175 4e-42 gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Mani... 175 4e-42 >ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like [Cucumis sativus] gi|449511798|ref|XP_004164056.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like [Cucumis sativus] Length = 265 Score = 177 bits (449), Expect = 8e-43 Identities = 81/83 (97%), Positives = 82/83 (98%) Frame = -1 Query: 250 LGGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 71 LGG RF+MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE Sbjct: 30 LGGARFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89 Query: 70 TFAKNRELEVIHSRWAMLGALGC 2 TFAKNRELEVIHSRWAMLGALGC Sbjct: 90 TFAKNRELEVIHSRWAMLGALGC 112 >emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypochondriacus] Length = 264 Score = 176 bits (445), Expect = 2e-42 Identities = 80/81 (98%), Positives = 81/81 (100%) Frame = -1 Query: 244 GGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 65 GGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF Sbjct: 31 GGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 90 Query: 64 AKNRELEVIHSRWAMLGALGC 2 A+NRELEVIHSRWAMLGALGC Sbjct: 91 ARNRELEVIHSRWAMLGALGC 111 >gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta] Length = 265 Score = 176 bits (445), Expect = 2e-42 Identities = 80/81 (98%), Positives = 81/81 (100%) Frame = -1 Query: 244 GGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 65 GGRF+MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF Sbjct: 32 GGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETF 91 Query: 64 AKNRELEVIHSRWAMLGALGC 2 AKNRELEVIHSRWAMLGALGC Sbjct: 92 AKNRELEVIHSRWAMLGALGC 112 >dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng] Length = 265 Score = 175 bits (443), Expect = 4e-42 Identities = 79/83 (95%), Positives = 82/83 (98%) Frame = -1 Query: 250 LGGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 71 LGGGR +MRRTV+SAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE Sbjct: 30 LGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89 Query: 70 TFAKNRELEVIHSRWAMLGALGC 2 TFAKNRELEVIHSRWAMLGALGC Sbjct: 90 TFAKNRELEVIHSRWAMLGALGC 112 >gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Manihot esculenta] Length = 243 Score = 175 bits (443), Expect = 4e-42 Identities = 80/82 (97%), Positives = 80/82 (97%) Frame = -1 Query: 247 GGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 68 GGGRFSMRRTVKSAP SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET Sbjct: 9 GGGRFSMRRTVKSAPPSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 68 Query: 67 FAKNRELEVIHSRWAMLGALGC 2 FAKNRELEVIH RWAMLGALGC Sbjct: 69 FAKNRELEVIHCRWAMLGALGC 90