BLASTX nr result

ID: Coptis24_contig00030181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030181
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97863.1| outward-rectifying potassium channel KCO1 [Eucaly...   256   6e-66
ref|XP_002264798.1| PREDICTED: calcium-activated outward-rectify...   250   4e-64
ref|XP_003635044.1| PREDICTED: calcium-activated outward-rectify...   250   5e-64
ref|XP_003635043.1| PREDICTED: calcium-activated outward-rectify...   245   1e-62
ref|XP_003544656.1| PREDICTED: calcium-activated outward-rectify...   245   2e-62

>gb|AAF97863.1| outward-rectifying potassium channel KCO1 [Eucalyptus camaldulensis]
          Length = 348

 Score =  256 bits (655), Expect = 6e-66
 Identities = 132/250 (52%), Positives = 167/250 (66%), Gaps = 3/250 (1%)
 Frame = +3

Query: 396  MDSNDAKKPTITALIDPPRPSQTKDIKRRYRHCKSAPTEFVFPGK---DGGTDLPKSIFT 566
            MD+N  K+P ++  ++ P+  + +  + R R CKSAP     P +   +G      SI  
Sbjct: 1    MDANGVKQPLLSKPLNSPQTDKKELKRNRLRRCKSAPLAEAVPQEANLNGPVQPSNSILR 60

Query: 567  KFHPSFWQXXXXXXXXXXXXXXCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVP 746
              HPSF +              CFYL +++I G+KTN   DA Y CIVTMTTVGYGDLVP
Sbjct: 61   NLHPSFKRVAIILVFYLGIGTMCFYLVRNEIDGEKTNDLFDAVYFCIVTMTTVGYGDLVP 120

Query: 747  NSIATKLLACAFVFTGMALVGLVLSKAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIKT 926
             S  TKLLACAFVF+GMA+VGL+LS+AADYLVEKQE+LLVKALH   +VG  +++KEI+T
Sbjct: 121  GSALTKLLACAFVFSGMAIVGLILSRAADYLVEKQEILLVKALHLRNKVGPTEMLKEIET 180

Query: 927  NRVKYKXXXXXXXXXXXXXXXTIFLSRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGGR 1106
            N V+YK               T FL+ +E+L +VD+FYCVCST+T+LGYGDKSFST GGR
Sbjct: 181  NGVRYKCVTAFILLLLLIVAGTTFLALIENLDIVDAFYCVCSTITTLGYGDKSFSTEGGR 240

Query: 1107 IFAVFWILTS 1136
            IFAVFWILTS
Sbjct: 241  IFAVFWILTS 250


>ref|XP_002264798.1| PREDICTED: calcium-activated outward-rectifying potassium channel 1
            [Vitis vinifera] gi|296089904|emb|CBI39723.3| unnamed
            protein product [Vitis vinifera]
          Length = 350

 Score =  250 bits (639), Expect = 4e-64
 Identities = 132/251 (52%), Positives = 168/251 (66%), Gaps = 5/251 (1%)
 Frame = +3

Query: 396  MDSNDAKKPTITALIDP-PRPSQTKDIKR-RYRHCKSAPTEF-VFPGKDGGTDLPKS--I 560
            MD   A KP++  L++P P+ +Q   +KR RYR C+SAP      P   G   L +S  I
Sbjct: 1    MDHGAAAKPSVLGLLNPSPQTNQKASLKRKRYRRCRSAPVAACTHPHPAGPDSLHRSQII 60

Query: 561  FTKFHPSFWQXXXXXXXXXXXXXXCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDL 740
              K HP+  +               FYL +  ++GKKTNG +DA Y CIVTM+TVGYGD+
Sbjct: 61   SRKLHPNVVKVIAVLALYLGAGTVIFYLTRHHMRGKKTNGVVDAVYFCIVTMSTVGYGDI 120

Query: 741  VPNSIATKLLACAFVFTGMALVGLVLSKAADYLVEKQEMLLVKALHFHQQVGRIDIMKEI 920
            VPNS+ATKLLACAFVF GMAL+ L LSKAADYLVEKQEMLLV+ALH +Q VG +++M+E+
Sbjct: 121  VPNSVATKLLACAFVFIGMALIALGLSKAADYLVEKQEMLLVRALHMNQNVGTVEMMREM 180

Query: 921  KTNRVKYKXXXXXXXXXXXXXXXTIFLSRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFG 1100
            +TNRVK K               T+FL+ VE +  VD+FYCVC T+T+LGYGD SF+T G
Sbjct: 181  ETNRVKNKCLVMSLILVVVIIAGTVFLAEVEGMSFVDAFYCVCCTITTLGYGDVSFTTQG 240

Query: 1101 GRIFAVFWILT 1133
            GR+FA+FWILT
Sbjct: 241  GRVFAIFWILT 251


>ref|XP_003635044.1| PREDICTED: calcium-activated outward-rectifying potassium channel
            1-like [Vitis vinifera] gi|297736715|emb|CBI25751.3|
            unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  250 bits (638), Expect = 5e-64
 Identities = 130/251 (51%), Positives = 169/251 (67%), Gaps = 4/251 (1%)
 Frame = +3

Query: 396  MDSNDAKKPTITALIDPPRPSQTKDIKRR-YRHCKSAPTEFV-FPGKDGGTDLP--KSIF 563
            M  ++AK+  ++  +DP   +++  +KRR  R C SAP   +   G +G   LP  KS+F
Sbjct: 1    MADDNAKQSLLSETVDPSHLNESNALKRRKIRRCGSAPLSVMNCSGHNGIGSLPHLKSMF 60

Query: 564  TKFHPSFWQXXXXXXXXXXXXXXCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLV 743
             K  PSF Q              CFYL + QIKG+KTNG LDA Y C+VTMTTVGYGDLV
Sbjct: 61   VKLEPSFKQVFILLAAYLAVGTLCFYLIRDQIKGRKTNGVLDAVYFCVVTMTTVGYGDLV 120

Query: 744  PNSIATKLLACAFVFTGMALVGLVLSKAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIK 923
            P++I  KLLAC FVF+GMAL GL+LS+AADY+VEKQE+LLVKA+H H++ G  +I+K+++
Sbjct: 121  PDTILAKLLACVFVFSGMALGGLILSRAADYIVEKQEVLLVKAMHRHEKAGPAEILKDVE 180

Query: 924  TNRVKYKXXXXXXXXXXXXXXXTIFLSRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGG 1103
            TN+VKYK               T+ LS VE L  +D+FYCVC T+T+LGYGD+SFST  G
Sbjct: 181  TNKVKYKFFLALILLLVLIIVGTLLLSLVEKLSFIDAFYCVCVTVTTLGYGDESFSTGVG 240

Query: 1104 RIFAVFWILTS 1136
            R FAVFWIL+S
Sbjct: 241  RAFAVFWILSS 251


>ref|XP_003635043.1| PREDICTED: calcium-activated outward-rectifying potassium channel
            1-like [Vitis vinifera] gi|297736711|emb|CBI25747.3|
            unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  245 bits (626), Expect = 1e-62
 Identities = 130/252 (51%), Positives = 169/252 (67%), Gaps = 5/252 (1%)
 Frame = +3

Query: 396  MDSNDAKKPTITALIDPPRPSQTKDIKRR--YRHCKSAPTEFV-FPGKDGGTDLP--KSI 560
            M  +DAK+  ++  +D    ++   +KRR  YR C SAP   +   G++G   LP  +S+
Sbjct: 1    MADDDAKQSLLSETVDSSHLNEINALKRRKIYR-CGSAPLSVMNCSGRNGIGSLPHLESM 59

Query: 561  FTKFHPSFWQXXXXXXXXXXXXXXCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDL 740
            F K  PSF Q              CFYL + QIKG+KTNG LDA Y C+VTMTTVGYGDL
Sbjct: 60   FVKLEPSFKQVFILLAAYLAVGTLCFYLIRDQIKGRKTNGVLDAVYFCVVTMTTVGYGDL 119

Query: 741  VPNSIATKLLACAFVFTGMALVGLVLSKAADYLVEKQEMLLVKALHFHQQVGRIDIMKEI 920
            VP++I  KLLAC FVF+GM L GL+LS+AADY+VEKQE+LLVKA+H H++VG  +I+K++
Sbjct: 120  VPDTILAKLLACLFVFSGMTLGGLILSRAADYIVEKQEVLLVKAMHRHEKVGPAEILKDV 179

Query: 921  KTNRVKYKXXXXXXXXXXXXXXXTIFLSRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFG 1100
            +TN+VKYK               T+ LS VE L  +D+FYCVC T+T+LGYGD+SFST  
Sbjct: 180  ETNKVKYKFFLALTLLLVLIIVGTLLLSLVEKLSFIDAFYCVCVTVTTLGYGDESFSTGV 239

Query: 1101 GRIFAVFWILTS 1136
            GR FAVFWIL+S
Sbjct: 240  GRAFAVFWILSS 251


>ref|XP_003544656.1| PREDICTED: calcium-activated outward-rectifying potassium channel
            1-like isoform 1 [Glycine max]
            gi|356552609|ref|XP_003544657.1| PREDICTED:
            calcium-activated outward-rectifying potassium channel
            1-like isoform 2 [Glycine max]
          Length = 348

 Score =  245 bits (625), Expect = 2e-62
 Identities = 129/249 (51%), Positives = 167/249 (67%), Gaps = 3/249 (1%)
 Frame = +3

Query: 396  MDSNDAKKPTITALIDPPRPSQTKDIKRRYRHCKSAPTEFVFPGKDGGTD-LPKS--IFT 566
            M +N  K+P +   +D  + ++ +  KR     +SAP   + P +  G + +P S  IF 
Sbjct: 1    MANNGVKEPLLWVSLDATQKTKQQLNKRSLLRFRSAPHAEIVPTETNGNESIPHSASIFQ 60

Query: 567  KFHPSFWQXXXXXXXXXXXXXXCFYLFKSQIKGKKTNGALDAAYLCIVTMTTVGYGDLVP 746
              HPSF +               FYL ++QIKG+KT+G LDA Y  IVTMTTVGYGDLVP
Sbjct: 61   NLHPSFKRVAIYLAVYLGVGALIFYLVRNQIKGQKTDGILDALYFTIVTMTTVGYGDLVP 120

Query: 747  NSIATKLLACAFVFTGMALVGLVLSKAADYLVEKQEMLLVKALHFHQQVGRIDIMKEIKT 926
            NS  TKLLACAFVF+GMAL+GL++SKAADYLVEKQE+LLVKA+  HQ+VG  +I++E++T
Sbjct: 121  NSHLTKLLACAFVFSGMALIGLIVSKAADYLVEKQELLLVKAMRMHQKVGSTEILREVQT 180

Query: 927  NRVKYKXXXXXXXXXXXXXXXTIFLSRVEDLGLVDSFYCVCSTMTSLGYGDKSFSTFGGR 1106
            N+ +YK               TIFL  VE L ++D+FYCVCST+T+LGYGD+SFST  GR
Sbjct: 181  NKTRYKLFLVFFLLLILIIAGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAGR 240

Query: 1107 IFAVFWILT 1133
            IFAVFWILT
Sbjct: 241  IFAVFWILT 249


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