BLASTX nr result

ID: Coptis24_contig00030180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030180
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25106.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002270465.1| PREDICTED: uncharacterized protein LOC100259...   100   2e-19
ref|XP_002272870.1| PREDICTED: uncharacterized protein LOC100262...    99   5e-19
emb|CAN66826.1| hypothetical protein VITISV_003578 [Vitis vinifera]    94   1e-17
ref|XP_002322121.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17

>emb|CBI25106.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/97 (55%), Positives = 66/97 (68%)
 Frame = -3

Query: 292 DLLDIEKKNTTXXXXXXXXLVCKKDSLPQNPKPQTCSGKLVTTSVAESQVLGKVKDFLGV 113
           DLL +E K ++        LVCK  S  +  KP    GK +TT V  SQVLGKVKDFLGV
Sbjct: 7   DLLHLEHKASSSSSLESTLLVCKNGSESKLQKPNHPKGKPITTPVPSSQVLGKVKDFLGV 66

Query: 112 MAEANARLQHDAKEKSCMEYDIEALTGNETEYIEMDL 2
           ++EAN +L+ DAK+ S  +YDIE LTGNE+EYIEMDL
Sbjct: 67  ISEANKKLELDAKDNSGKDYDIEVLTGNESEYIEMDL 103


>ref|XP_002270465.1| PREDICTED: uncharacterized protein LOC100259936 [Vitis vinifera]
          Length = 208

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/97 (55%), Positives = 66/97 (68%)
 Frame = -3

Query: 292 DLLDIEKKNTTXXXXXXXXLVCKKDSLPQNPKPQTCSGKLVTTSVAESQVLGKVKDFLGV 113
           DLL +E K ++        LVCK  S  +  KP    GK +TT V  SQVLGKVKDFLGV
Sbjct: 7   DLLHLEHKASSSSSLESTLLVCKNGSESKLQKPNHPKGKPITTPVPSSQVLGKVKDFLGV 66

Query: 112 MAEANARLQHDAKEKSCMEYDIEALTGNETEYIEMDL 2
           ++EAN +L+ DAK+ S  +YDIE LTGNE+EYIEMDL
Sbjct: 67  ISEANKKLELDAKDNSGKDYDIEVLTGNESEYIEMDL 103


>ref|XP_002272870.1| PREDICTED: uncharacterized protein LOC100262735 [Vitis vinifera]
           gi|296082633|emb|CBI21638.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/97 (54%), Positives = 66/97 (68%)
 Frame = -3

Query: 292 DLLDIEKKNTTXXXXXXXXLVCKKDSLPQNPKPQTCSGKLVTTSVAESQVLGKVKDFLGV 113
           DLL +E K ++        LVCK  S  +  KP    GK +TT +  SQVLGKVKDFLGV
Sbjct: 7   DLLHLEHKASSSSSLESTLLVCKNGSESKLQKPNHPKGKPITTPLPSSQVLGKVKDFLGV 66

Query: 112 MAEANARLQHDAKEKSCMEYDIEALTGNETEYIEMDL 2
           ++EAN +L+ DAK+ S  +YDIE LTGNE+EYIEMDL
Sbjct: 67  ISEANKKLELDAKDNSGKDYDIEVLTGNESEYIEMDL 103


>emb|CAN66826.1| hypothetical protein VITISV_003578 [Vitis vinifera]
          Length = 228

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/77 (62%), Positives = 57/77 (74%)
 Frame = -3

Query: 232 VCKKDSLPQNPKPQTCSGKLVTTSVAESQVLGKVKDFLGVMAEANARLQHDAKEKSCMEY 53
           VCK  S  +  KP    GK +TT V  SQVLGKVKDFLGV++EAN +L+ DAK+ S  +Y
Sbjct: 47  VCKNGSESKLQKPNHPKGKPITTPVPSSQVLGKVKDFLGVISEANKKLELDAKDNSGKDY 106

Query: 52  DIEALTGNETEYIEMDL 2
           DIE LTGNE+EYIEMDL
Sbjct: 107 DIEVLTGNESEYIEMDL 123


>ref|XP_002322121.1| predicted protein [Populus trichocarpa] gi|222869117|gb|EEF06248.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
 Frame = -3

Query: 292 DLLDIEKKN-TTXXXXXXXXLVCKKDSLPQNPKPQTCSGKLVTTSVAESQVLGKVKDFLG 116
           DLL +E K   T         VC+KDS P+ P      GK +TT V +SQVLGKV+DF+G
Sbjct: 7   DLLHLENKYFVTPSSLESILRVCEKDSGPRKPP---ADGKPLTTPVPQSQVLGKVRDFIG 63

Query: 115 VMAEANARLQHDAKEKSCMEYDIEALTGNETEYIEMDL 2
           V++EAN RLQ DAK+ S  +YDIE LTGNE+E +EMDL
Sbjct: 64  VISEANKRLQEDAKDNS-EKYDIETLTGNESEVVEMDL 100


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