BLASTX nr result

ID: Coptis24_contig00030179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030179
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285510.1| PREDICTED: uncharacterized protein LOC100255...   106   2e-21
emb|CAN72546.1| hypothetical protein VITISV_013476 [Vitis vinifera]   106   2e-21
ref|XP_002524529.1| conserved hypothetical protein [Ricinus comm...    99   3e-19
ref|XP_002331715.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_003543202.1| PREDICTED: uncharacterized protein LOC100799...    98   8e-19

>ref|XP_002285510.1| PREDICTED: uncharacterized protein LOC100255640 [Vitis vinifera]
          Length = 454

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   LSYKHFAVVHQRVVESICSFVKLVIEKMCSSGWDIGAAANAIEPGMRYGKLNERRFAFES 180
           +S  HF  V Q  V+SI SFV+L+I +M SSGWDI AAA AI+P + + K   R  AFES
Sbjct: 213 ISPSHFITVLQHTVKSIRSFVRLMINEMESSGWDINAAAAAIQPSVVFLKATHRCLAFES 272

Query: 181 FVCREMFDGFHYSNFSSLNE---QECRSQRRFFDKFMELKSINAMEMLKVK 324
           FVCREMFD FH+ NFS  NE   ++ + QR FF++F++LKS    E L  K
Sbjct: 273 FVCREMFDSFHFPNFSLPNESLPEQNQWQRFFFERFIKLKSTRVKEYLAQK 323


>emb|CAN72546.1| hypothetical protein VITISV_013476 [Vitis vinifera]
          Length = 505

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/111 (52%), Positives = 74/111 (66%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   LSYKHFAVVHQRVVESICSFVKLVIEKMCSSGWDIGAAANAIEPGMRYGKLNERRFAFES 180
           +S  HF  V Q  V+SI SFV+L+I +M SSGWDI AAA AI+P + + K   R  AFES
Sbjct: 224 ISPSHFITVLQHTVKSIRSFVRLMINEMESSGWDINAAAAAIQPSVVFLKATHRCLAFES 283

Query: 181 FVCREMFDGFHYSNFSSLNE---QECRSQRRFFDKFMELKSINAMEMLKVK 324
           FVCREMFD FH+ NFS  NE   ++ + QR FF++F++LKS    E L  K
Sbjct: 284 FVCREMFDSFHFPNFSLPNESLPEQNQWQRFFFERFIKLKSTRVKEYLAQK 334


>ref|XP_002524529.1| conserved hypothetical protein [Ricinus communis]
           gi|223536203|gb|EEF37856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 466

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/113 (48%), Positives = 78/113 (69%), Gaps = 5/113 (4%)
 Frame = +1

Query: 1   LSYKHFAVVHQRVVESICSFVKLVIEKMCSSGWDIGAAANAIEPGMRYGKLNERRFAFES 180
           LS  HF  V +  V+SI SFVKL+I++M ++ WD+ AAAN+I P + Y + +++ FAFES
Sbjct: 216 LSPSHFTAVVRFTVKSIQSFVKLMIDQMKAADWDLDAAANSIVPDVVYWRADDKCFAFES 275

Query: 181 FVCREMFDGFHYSNF-----SSLNEQECRSQRRFFDKFMELKSINAMEMLKVK 324
           FVCRE+FDGFH  NF     SSL E++ ++Q  FF +F EL+S+ A + L  K
Sbjct: 276 FVCREIFDGFHLPNFSLPSESSLLERKNQNQ-LFFKRFTELRSVKAKDYLAQK 327


>ref|XP_002331715.1| predicted protein [Populus trichocarpa] gi|222874321|gb|EEF11452.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/111 (48%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   LSYKHFAVVHQRVVESICSFVKLVIEKMCSSGWDIGAAANAIEPGMRYGKLNERRFAFES 180
           LS  HF  V    V+SI SFVKL+I++M S+GWD+ AAA  I   + Y + +++ FAFES
Sbjct: 216 LSPSHFITVLLHTVKSIRSFVKLMIDEMKSTGWDLDAAAKCIVSDVAYRRADDKCFAFES 275

Query: 181 FVCREMFDGFHYSNFSSLNE---QECRSQRRFFDKFMELKSINAMEMLKVK 324
           FV REMFDGFH +NFS   E   ++   Q+ FF +F+ELKS  A E +  K
Sbjct: 276 FVSREMFDGFHLTNFSPQKESPPEKKNQQQLFFKRFVELKSTKATEYIAHK 326


>ref|XP_003543202.1| PREDICTED: uncharacterized protein LOC100799419 isoform 1 [Glycine
           max] gi|356549647|ref|XP_003543203.1| PREDICTED:
           uncharacterized protein LOC100799419 isoform 2 [Glycine
           max]
          Length = 474

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   LSYKHFAVVHQRVVESICSFVKLVIEKMCSSGWDIGAAANAIEPGMRYGKLNERRFAFES 180
           LS  HF +V +  V SI +FV+LV+++M S+GWDI AA +AIE  + Y   + + FA E+
Sbjct: 217 LSPSHFIMVLRHAVRSIRNFVRLVVDEMRSAGWDIDAAVDAIEQNVVYMAEDHKCFAMEA 276

Query: 181 FVCREMFDGFHYSNFSSLNEQECRSQRR---FFDKFMELKSINAMEML 315
           FVCREMFD FH  NFS  +E      RR   FF KF ELKS+ A + L
Sbjct: 277 FVCREMFDAFHIPNFSLSSESPLEKNRRQQWFFGKFNELKSMKAKDYL 324


Top