BLASTX nr result

ID: Coptis24_contig00030169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030169
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316406.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244...   124   1e-26
ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794...   121   7e-26
ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786...   120   9e-26
ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780...   119   2e-25

>ref|XP_002316406.1| predicted protein [Populus trichocarpa] gi|222865446|gb|EEF02577.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/94 (67%), Positives = 72/94 (76%)
 Frame = -1

Query: 455 MADKISWHCIXXXXXXXXLSCCDSSETKSSLMMNQGMANNRPCDEIYVVADGETLHTISE 276
           MA+KISW+C         LSCC+ SET+ S + +     N+PCDEIYVV +GETL+TISE
Sbjct: 1   MAEKISWYCALLMALMLVLSCCEVSETELSTVGHPRFFENKPCDEIYVVREGETLNTISE 60

Query: 275 KCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 174
           KC DPYIVEENPHIHDPDDVFPGLVIKITP I R
Sbjct: 61  KCGDPYIVEENPHIHDPDDVFPGLVIKITPLIDR 94


>ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244252 [Vitis vinifera]
          Length = 104

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = -1

Query: 455 MADKISWHCIXXXXXXXXLSCCDSSETKSSLMMNQGMAN-NRPCDEIYVVADGETLHTIS 279
           +A+KISW+          LSCC+S+++   +M+     +  +PCDEIYVV +GETLHTIS
Sbjct: 10  LAEKISWYSALLLALMLVLSCCESAQSHDEIMVRLHKKDAKKPCDEIYVVREGETLHTIS 69

Query: 278 EKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 174
           EKC DPYIVEENPHIHDPDDVFPGLVIKITP+  R
Sbjct: 70  EKCGDPYIVEENPHIHDPDDVFPGLVIKITPYNYR 104


>ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794241 [Glycine max]
          Length = 99

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/99 (61%), Positives = 71/99 (71%), Gaps = 5/99 (5%)
 Frame = -1

Query: 455 MADKISWHCIXXXXXXXXLSCCDSS--ETKSSLMMNQGMANN---RPCDEIYVVADGETL 291
           MA+KISW C+        LSCC+SS  E +  ++M + + NN   + CDEIYVV +GETL
Sbjct: 1   MAEKISWCCVLFMAIILVLSCCESSTNEFRVQMLMQRNINNNNNKKACDEIYVVREGETL 60

Query: 290 HTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 174
            TISEKC DPYIVEENPHI DPDDVFPGLVIKI PF  R
Sbjct: 61  QTISEKCGDPYIVEENPHIQDPDDVFPGLVIKINPFTNR 99


>ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786697 [Glycine max]
          Length = 108

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/98 (61%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
 Frame = -1

Query: 455 MADKISWHCIXXXXXXXXLSCCDS--SETKSSLMMNQGMAN--NRPCDEIYVVADGETLH 288
           MA+KISW+C         LS C+S  S+  + +M ++ ++N  N+ CDEIYVV +GETL 
Sbjct: 10  MAEKISWNCAVFVALMLVLSSCESNTSDFTTQMMFHESVSNSNNKACDEIYVVREGETLQ 69

Query: 287 TISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 174
           TISEKC DPYIVEENPHIHDPDDVFPGLVIKI PF  R
Sbjct: 70  TISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 107


>ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780595 [Glycine max]
          Length = 206

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 8/103 (7%)
 Frame = -1

Query: 458 TMADKISWHCIXXXXXXXXLSCCDS--SETKSSLMMNQGMA------NNRPCDEIYVVAD 303
           T+A+KISW+C         LS C+S  S+  S +M++  +       NN+ CDEIYVV +
Sbjct: 9   TLAEKISWNCSVFVALMLVLSSCESNTSDFTSQMMLHGSVTGNISNNNNKACDEIYVVRE 68

Query: 302 GETLHTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 174
           GETL TISEKC DPYIVEENPHIHDPDDVFPGLVIKI PF  R
Sbjct: 69  GETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 111


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