BLASTX nr result

ID: Coptis24_contig00030165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030165
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19539.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002284599.1| PREDICTED: uncharacterized protein LOC100264...    70   1e-10
emb|CAN63227.1| hypothetical protein VITISV_002666 [Vitis vinifera]    69   5e-10
ref|XP_002327127.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002301193.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>emb|CBI19539.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
 Frame = -1

Query: 276 ALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIVTIRTRSLEAKLRRRGPLTMN----Q 109
           A ++CH FGG+  +   DEE+   D DDE+E V+  IR+++ EAKLRR+  L  +     
Sbjct: 57  AFSNCHAFGGKLPSASPDEENPPSDVDDEEEVVVSAIRSKAREAKLRRKTSLLSDSFKLD 116

Query: 108 SFTSILSATAGELFIASKGVQHK-TEEDDLEREALFT 1
           SF+ + S   GELF   K +Q +  ++DD ERE  F+
Sbjct: 117 SFSRVFSPRTGELFATPKELQQREDDDDDEEREDYFS 153


>ref|XP_002284599.1| PREDICTED: uncharacterized protein LOC100264238 [Vitis vinifera]
          Length = 207

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
 Frame = -1

Query: 276 ALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIVTIRTRSLEAKLRRRGPLTMN----Q 109
           A ++CH FGG+  +   DEE+   D DDE+E V+  IR+++ EAKLRR+  L  +     
Sbjct: 24  AFSNCHAFGGKLPSASPDEENPPSDVDDEEEVVVSAIRSKAREAKLRRKTSLLSDSFKLD 83

Query: 108 SFTSILSATAGELFIASKGVQHK-TEEDDLEREALFT 1
           SF+ + S   GELF   K +Q +  ++DD ERE  F+
Sbjct: 84  SFSRVFSPRTGELFATPKELQQREDDDDDEEREDYFS 120


>emb|CAN63227.1| hypothetical protein VITISV_002666 [Vitis vinifera]
          Length = 146

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = -1

Query: 276 ALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIVTIRTRSLEAKLRRRGPLTMN----Q 109
           A ++CH FGG+  +   DEE+   D DDE+E V+  IR+++ EAKLRR+  L        
Sbjct: 52  AFSNCHAFGGKLPSASPDEENPPSDVDDEEEVVVSAIRSKAREAKLRRKTSLJSXSFKLD 111

Query: 108 SFTSILSATAGELFIASKGVQHKTEEDDLE 19
           SF+ + S   GELF   K +Q + ++DD E
Sbjct: 112 SFSRVFSPRTGELFATPKELQQREDDDDDE 141


>ref|XP_002327127.1| predicted protein [Populus trichocarpa] gi|222835442|gb|EEE73877.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/86 (40%), Positives = 51/86 (59%)
 Frame = -1

Query: 270 AHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIVTIRTRSLEAKLRRRGPLTMNQSFTSIL 91
           ++C   GG+ ST   +EE+   D DD+QE ++  IR+R++E KLR + P     SF+ + 
Sbjct: 28  SNCSACGGQISTPGPEEEYPTTDVDDDQEIIVSEIRSRAME-KLRHK-PFVFTDSFSWVY 85

Query: 90  SATAGELFIASKGVQHKTEEDDLERE 13
           S   GELF+  K VQ K E+D  E E
Sbjct: 86  SPMTGELFVTPKAVQQKEEDDSSEDE 111


>ref|XP_002301193.1| predicted protein [Populus trichocarpa] gi|222842919|gb|EEE80466.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/82 (41%), Positives = 49/82 (59%)
 Frame = -1

Query: 270 AHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIVTIRTRSLEAKLRRRGPLTMNQSFTSIL 91
           ++C   GGR ST   +EE+   D DDEQE ++  IR+R++E KLR + P     SF+ + 
Sbjct: 28  SNCSTCGGRISTSSPEEEYPTADVDDEQEVIVSEIRSRAME-KLRHK-PFIFTDSFSWVY 85

Query: 90  SATAGELFIASKGVQHKTEEDD 25
           S   GELF+  K VQ K + +D
Sbjct: 86  SPKTGELFVTPKAVQQKDDGND 107


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