BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030162
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26175.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea m...   179   3e-43

>emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  189 bits (480), Expect = 2e-46
 Identities = 84/122 (68%), Positives = 103/122 (84%)
 Frame = +2

Query: 2   KCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPNSITF 181
           KCGSI+ AL+ F+ +QDR+ S+SPWNAIICGLA+HGHA++SL++FS LQR  I+PNSITF
Sbjct: 420 KCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITF 479

Query: 182 IGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLIMRMP 361
           IGVLSACCHAGL++ GE YF  MK +Y IEPNIKHYGCM+DL GR GRL EA  +I +MP
Sbjct: 480 IGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMP 539

Query: 362 MR 367
           M+
Sbjct: 540 MK 541


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  189 bits (480), Expect = 2e-46
 Identities = 84/122 (68%), Positives = 103/122 (84%)
 Frame = +2

Query: 2   KCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPNSITF 181
           KCGSI+ AL+ F+ +QDR+ S+SPWNAIICGLA+HGHA++SL++FS LQR  I+PNSITF
Sbjct: 495 KCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITF 554

Query: 182 IGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLIMRMP 361
           IGVLSACCHAGL++ GE YF  MK +Y IEPNIKHYGCM+DL GR GRL EA  +I +MP
Sbjct: 555 IGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMP 614

Query: 362 MR 367
           M+
Sbjct: 615 MK 616


>ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 703

 Score =  180 bits (457), Expect = 9e-44
 Identities = 81/122 (66%), Positives = 102/122 (83%)
 Frame = +2

Query: 2   KCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPNSITF 181
           KCGSI TAL+ F +++D+  ++SPWNAIICGLA+HGHA++SL +FS+LQR  I+ NSITF
Sbjct: 504 KCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITF 563

Query: 182 IGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLIMRMP 361
           +GVLSACCHAGL+E GE YF SMK  +G+EPNIKHYGC+VDL GR GRL EAE ++  MP
Sbjct: 564 LGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMP 623

Query: 362 MR 367
           M+
Sbjct: 624 MK 625


>ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
            mitochondrial-like [Cucumis sativus]
          Length = 874

 Score =  180 bits (457), Expect = 9e-44
 Identities = 81/122 (66%), Positives = 102/122 (83%)
 Frame = +2

Query: 2    KCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPNSITF 181
            KCGSI TAL+ F +++D+  ++SPWNAIICGLA+HGHA++SL +FS+LQR  I+ NSITF
Sbjct: 675  KCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITF 734

Query: 182  IGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLIMRMP 361
            +GVLSACCHAGL+E GE YF SMK  +G+EPNIKHYGC+VDL GR GRL EAE ++  MP
Sbjct: 735  LGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMP 794

Query: 362  MR 367
            M+
Sbjct: 795  MK 796


>tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
          Length = 714

 Score =  179 bits (453), Expect = 3e-43
 Identities = 81/122 (66%), Positives = 101/122 (82%)
 Frame = +2

Query: 2   KCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPNSITF 181
           KCGSI+ A++ F+R+ D+  S+SPWNA+IC LAIHG+A MSL +FS LQRT I+PNSITF
Sbjct: 456 KCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITF 515

Query: 182 IGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLIMRMP 361
           IGVLSACCHAG + +G++YF+SM R YGI+P IKHYGCMVDL GR G L EAE+L+  MP
Sbjct: 516 IGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMP 575

Query: 362 MR 367
           M+
Sbjct: 576 MK 577



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +2

Query: 8   GSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPNSITFIG 187
           G I  A E F  + +R      W+ +I G    G +DM+L++F  +  T I PN +T   
Sbjct: 357 GLIREARELFDDMPER--DTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLAS 414

Query: 188 VLSACCHAGLIEQGEWYFD-SMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLIMRM 358
            LSA   +G ++QG+W  D  M R   +  N+     ++D++ +CG +A+A +   R+
Sbjct: 415 ALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNRV 470