BLASTX nr result

ID: Coptis24_contig00030161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030161
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281133.1| PREDICTED: probably inactive leucine-rich re...    84   9e-15
emb|CAN61202.1| hypothetical protein VITISV_009745 [Vitis vinifera]    81   8e-14
ref|XP_003523747.1| PREDICTED: probably inactive leucine-rich re...    69   3e-10
ref|XP_002324214.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_003527844.1| PREDICTED: probably inactive leucine-rich re...    67   1e-09

>ref|XP_002281133.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At2g25790 [Vitis vinifera]
           gi|296081832|emb|CBI20837.3| unnamed protein product
           [Vitis vinifera]
          Length = 967

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/63 (61%), Positives = 48/63 (76%)
 Frame = +2

Query: 128 FIVAVLFLFSSFVIATNGQEEIKLLLTFKASLRDPFRFLSNWNASNDICNWYGISCINSS 307
           FI+++ F F SF    + +EEI+LLL+FKAS+ DP  FLSNWN+S D CNWYGI C NSS
Sbjct: 12  FIISMFFFFFSF--GMSAREEIELLLSFKASINDPLGFLSNWNSSVDFCNWYGILCTNSS 69

Query: 308 HVS 316
           HVS
Sbjct: 70  HVS 72


>emb|CAN61202.1| hypothetical protein VITISV_009745 [Vitis vinifera]
          Length = 838

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = +2

Query: 143 LFLFSSFVIATNGQEEIKLLLTFKASLRDPFRFLSNWNASNDICNWYGISCINSSHVS 316
           +F F  F    + +EEI+LLL+FKAS+ DP  FLSNWN+S D CNWYGI C NSSHVS
Sbjct: 16  MFFFFFFSFGMSAREEIELLLSFKASINDPLGFLSNWNSSVDFCNWYGILCTNSSHVS 73


>ref|XP_003523747.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At2g25790-like [Glycine max]
          Length = 982

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
 Frame = +2

Query: 92  AYRMASKIGTSFFIVAVLFLFSSFVIATNGQEEIKLLLTFKASLRDPFRFLSNW---NAS 262
           +Y ++SK  +  FI   +F+ + F+++   Q E++LLL+FKASL DP  FLSNW    +S
Sbjct: 5   SYSISSKARSMKFIFLFMFMLN-FILSDGDQHEVQLLLSFKASLHDPLHFLSNWVSFTSS 63

Query: 263 NDICNWYGISC---INSSHVS 316
             IC W+GI+C    NSSHV+
Sbjct: 64  ATICKWHGINCDNNANSSHVN 84


>ref|XP_002324214.1| predicted protein [Populus trichocarpa] gi|222865648|gb|EEF02779.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = +2

Query: 140 VLFLFSSFVIATNGQEEIKLLLTFKASLRDPFRFLSNWNASNDICNWYGISCINSSHVS 316
           +LFLF +  ++    +E++LLL+FK SL DP ++LSNWN S   CNW GI+C NSS +S
Sbjct: 17  LLFLFLNSRMSNAENQELELLLSFKTSLNDPSKYLSNWNTSATFCNWLGITCTNSSRIS 75


>ref|XP_003527844.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At2g25790-like [Glycine max]
          Length = 984

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
 Frame = +2

Query: 92  AYRMASKIGTSFFIVAVLFLFSSFVIATNGQEEIKLLLTFKASLRDPFRFLSNW---NAS 262
           +Y M+SK  +  FI   +F+ + F ++   Q+E++LLL+FK SL DP  FLSNW    +S
Sbjct: 5   SYSMSSKTKSMKFICLFVFMLN-FHLSHGHQQEVQLLLSFKGSLHDPLHFLSNWVSFTSS 63

Query: 263 NDICNWYGISC-----INSSHVS 316
             IC W+GI+C     +NSSHV+
Sbjct: 64  ATICKWHGITCDNNNNVNSSHVN 86


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