BLASTX nr result

ID: Coptis24_contig00030156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030156
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22591.3| unnamed protein product [Vitis vinifera]              351   7e-95
ref|XP_002513617.1| conserved hypothetical protein [Ricinus comm...   351   1e-94
ref|XP_004149462.1| PREDICTED: WD repeat-containing protein 91 h...   333   3e-89
ref|XP_003535585.1| PREDICTED: WD repeat-containing protein 91-l...   332   5e-89
ref|XP_003592160.1| WD repeat-containing protein [Medicago trunc...   330   2e-88

>emb|CBI22591.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  351 bits (901), Expect = 7e-95
 Identities = 173/233 (74%), Positives = 192/233 (82%)
 Frame = -1

Query: 700 SQSEDDSTSSAKLSAVGSGSTDNYQMFRDDYYSVEDGEVRREEEFPEVKVDFQETFLGHT 521
           S S+  S+S   L    +G+++  +M +DD+ +    E+  EEEFPEVKVDFQETFLGHT
Sbjct: 293 SNSDRGSSSLVHLHLGDAGASNMLEMSQDDFCTENGREMEGEEEFPEVKVDFQETFLGHT 352

Query: 520 SPISRCRFSASGSNIASASMDGTVRIWTYDSSTPTSRNAAIYCGAEILSLDWECKSDRLL 341
           SPISRCRFS SG NIASAS+DGTVRIWTYDSSTPTSRNA IYCGAEI+SL+WECKSDRLL
Sbjct: 353 SPISRCRFSVSGDNIASASVDGTVRIWTYDSSTPTSRNATIYCGAEIMSLEWECKSDRLL 412

Query: 340 LIGTANGGIKAWNVDAKRVVCDLNTTQAFPSVLDLKCSPVEPIFVXXXXXXXXXXXNLDN 161
           LIGTA+GGIKAWNVDAKRVVCDLNTT+AFPSVLDLKCSPVEPIFV             D 
Sbjct: 413 LIGTADGGIKAWNVDAKRVVCDLNTTEAFPSVLDLKCSPVEPIFVSAAASRGQGRNYFDK 472

Query: 160 LKYASLTVWNMKTWKPMTVLPLGEDPPAITSLSFNHNGKILAAAATDGMIHIF 2
             +ASLTVWNMKTWK +TVLPLGEDPPAITSL FNHNGKILAAAATDGMIH+F
Sbjct: 473 FGFASLTVWNMKTWKAVTVLPLGEDPPAITSLCFNHNGKILAAAATDGMIHMF 525


>ref|XP_002513617.1| conserved hypothetical protein [Ricinus communis]
           gi|223547525|gb|EEF49020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 655

 Score =  351 bits (900), Expect = 1e-94
 Identities = 174/236 (73%), Positives = 193/236 (81%)
 Frame = -1

Query: 709 STLSQSEDDSTSSAKLSAVGSGSTDNYQMFRDDYYSVEDGEVRREEEFPEVKVDFQETFL 530
           S  S+   DS+S A++      ++   Q      +S    E   EEEFPEVKVDFQETFL
Sbjct: 282 SGASKDARDSSSIARIDREDGKTSGTIQTVHGGPFSDNGTETLGEEEFPEVKVDFQETFL 341

Query: 529 GHTSPISRCRFSASGSNIASASMDGTVRIWTYDSSTPTSRNAAIYCGAEILSLDWECKSD 350
           GHTSPISRCRFSASG+NIASAS+DGTVRIWTYDSSTPTSRNA IYCGAEI+SLDWECKSD
Sbjct: 342 GHTSPISRCRFSASGNNIASASVDGTVRIWTYDSSTPTSRNATIYCGAEIMSLDWECKSD 401

Query: 349 RLLLIGTANGGIKAWNVDAKRVVCDLNTTQAFPSVLDLKCSPVEPIFVXXXXXXXXXXXN 170
           RLLLIGTA+GGIKAWNVDAKRVVCDLNT++AFPSVLDLKCSPVEP+FV            
Sbjct: 402 RLLLIGTADGGIKAWNVDAKRVVCDLNTSEAFPSVLDLKCSPVEPVFVSAAASRRHGSSY 461

Query: 169 LDNLKYASLTVWNMKTWKPMTVLPLGEDPPAITSLSFNHNGKILAAAATDGMIHIF 2
           LD+L+YASLTVWNMKTW+ +TVLPLGEDPPAITSL FNHNGKILAAAATDGMIH+F
Sbjct: 462 LDSLRYASLTVWNMKTWRAITVLPLGEDPPAITSLCFNHNGKILAAAATDGMIHMF 517


>ref|XP_004149462.1| PREDICTED: WD repeat-containing protein 91 homolog [Cucumis
           sativus] gi|449523658|ref|XP_004168840.1| PREDICTED: WD
           repeat-containing protein 91 homolog [Cucumis sativus]
          Length = 343

 Score =  333 bits (853), Expect = 3e-89
 Identities = 159/200 (79%), Positives = 176/200 (88%)
 Frame = -1

Query: 601 VEDGEVRREEEFPEVKVDFQETFLGHTSPISRCRFSASGSNIASASMDGTVRIWTYDSST 422
           V  GEV  +E+FPEVKV+FQETFLGHTSPISRCRFSASG+N+ASAS+DGTVRIWTYDSST
Sbjct: 6   VNSGEVHVQEDFPEVKVEFQETFLGHTSPISRCRFSASGNNVASASLDGTVRIWTYDSST 65

Query: 421 PTSRNAAIYCGAEILSLDWECKSDRLLLIGTANGGIKAWNVDAKRVVCDLNTTQAFPSVL 242
           P+SRNA IYCGAEI+SLDWECKSDRLLLIGTA+ GIKAWNVDAKRVVCDLNTT  FPSVL
Sbjct: 66  PSSRNATIYCGAEIMSLDWECKSDRLLLIGTADAGIKAWNVDAKRVVCDLNTTDMFPSVL 125

Query: 241 DLKCSPVEPIFVXXXXXXXXXXXNLDNLKYASLTVWNMKTWKPMTVLPLGEDPPAITSLS 62
           D+KCSPVE IFV            +D+L +ASLTVWNM+TWK MTVLPLG+DPPAITS+ 
Sbjct: 126 DIKCSPVESIFVSAAASRGHGTSYVDSLGFASLTVWNMRTWKSMTVLPLGKDPPAITSMC 185

Query: 61  FNHNGKILAAAATDGMIHIF 2
           FNHNGKILAAAATDGMIH+F
Sbjct: 186 FNHNGKILAAAATDGMIHMF 205


>ref|XP_003535585.1| PREDICTED: WD repeat-containing protein 91-like [Glycine max]
          Length = 631

 Score =  332 bits (851), Expect = 5e-89
 Identities = 167/233 (71%), Positives = 189/233 (81%)
 Frame = -1

Query: 700 SQSEDDSTSSAKLSAVGSGSTDNYQMFRDDYYSVEDGEVRREEEFPEVKVDFQETFLGHT 521
           S S +DST+      + +G  DN  + +D+     +GEV  EE+F EVKV++QETFLGHT
Sbjct: 266 STSGNDSTTFLSNDRMRNGRADNATL-KDN-----NGEVFGEEDFAEVKVEYQETFLGHT 319

Query: 520 SPISRCRFSASGSNIASASMDGTVRIWTYDSSTPTSRNAAIYCGAEILSLDWECKSDRLL 341
            PISRC FSASG+NIASAS+DGTVRIWTYD+STP SRNA IYCG EILSLDWECKSDRLL
Sbjct: 320 GPISRCCFSASGNNIASASLDGTVRIWTYDTSTPVSRNATIYCGTEILSLDWECKSDRLL 379

Query: 340 LIGTANGGIKAWNVDAKRVVCDLNTTQAFPSVLDLKCSPVEPIFVXXXXXXXXXXXNLDN 161
           LIGT++G IKAWNVDAKRVVCDLNTT+AFPSVLD+KCSPVEPIFV            +DN
Sbjct: 380 LIGTSDGCIKAWNVDAKRVVCDLNTTEAFPSVLDIKCSPVEPIFVSAAASGGAGSNYIDN 439

Query: 160 LKYASLTVWNMKTWKPMTVLPLGEDPPAITSLSFNHNGKILAAAATDGMIHIF 2
           L +ASLTVWNMKTWK MTVLPLGEDPPAITSL FNHNGKILAA+A DGMIH+F
Sbjct: 440 LGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMF 492


>ref|XP_003592160.1| WD repeat-containing protein [Medicago truncatula]
           gi|355481208|gb|AES62411.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 446

 Score =  330 bits (845), Expect = 2e-88
 Identities = 168/234 (71%), Positives = 185/234 (79%), Gaps = 1/234 (0%)
 Frame = -1

Query: 700 SQSEDDSTSSAKLSAVGSGSTDNYQMFRDDYYSVE-DGEVRREEEFPEVKVDFQETFLGH 524
           S+S DDST       +  G   N  +   D   +E DGE+  EE+F EVKV+ QETFLGH
Sbjct: 76  SKSGDDSTFILN-DYLEHGRAGNTTLKGHDSPHIENDGELSSEEDFVEVKVEHQETFLGH 134

Query: 523 TSPISRCRFSASGSNIASASMDGTVRIWTYDSSTPTSRNAAIYCGAEILSLDWECKSDRL 344
           TSPISRCRFSASG+NIASAS+DGT RIWTYD+STP SRNA IYCG EILSLDWECKSDRL
Sbjct: 135 TSPISRCRFSASGNNIASASLDGTARIWTYDASTPASRNATIYCGTEILSLDWECKSDRL 194

Query: 343 LLIGTANGGIKAWNVDAKRVVCDLNTTQAFPSVLDLKCSPVEPIFVXXXXXXXXXXXNLD 164
           LLIGT++  IKAWNVDAKRVVCDLNTT+AFPSVLD+KCSPVEPIFV             D
Sbjct: 195 LLIGTSDACIKAWNVDAKRVVCDLNTTEAFPSVLDIKCSPVEPIFVSAAASGGSGSNYFD 254

Query: 163 NLKYASLTVWNMKTWKPMTVLPLGEDPPAITSLSFNHNGKILAAAATDGMIHIF 2
           NL +ASLTVWNMKTWK MTVLPLGEDPPAITSL FNHNGKILAA+A DGMIH+F
Sbjct: 255 NLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMF 308


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