BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030144
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002538760.1| hypothetical protein RCOM_2139380 [Ricinus c...   107   2e-21
ref|XP_002512653.1| hypothetical protein RCOM_1438010 [Ricinus c...   105   6e-21
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   105   6e-21
ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21
ref|XP_002515641.1| RNA binding protein, putative [Ricinus commu...   103   1e-20

>ref|XP_002538760.1| hypothetical protein RCOM_2139380 [Ricinus communis]
           gi|223510536|gb|EEF23623.1| hypothetical protein
           RCOM_2139380 [Ricinus communis]
          Length = 201

 Score =  107 bits (266), Expect = 2e-21
 Identities = 57/132 (43%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
 Frame = +3

Query: 129 KQAFLIDQNSDNEVLENDNLPFIKTYSGWKELESMEVFRSMPQKPHFGSLQNQPELLREG 308
           KQ+ +I+     E++EN  +PF+K+   WK +ES+EVF+ +PQKPHF  L    E  REG
Sbjct: 10  KQSSVINVPEATELVENLEMPFLKSSLIWKNIESLEVFQVLPQKPHFSPLIGHKEASREG 69

Query: 309 QAVGLMISFAKLVEKTSKLQIDEPKCVLENILEVLPHFEA-CFDVGPIRALLKELLRVKD 485
            A+G M+SFA L+EK SKLQ+D+ + V E+ +EVL   E   F+V  I   L++LL +KD
Sbjct: 70  MAMGHMLSFAVLIEKMSKLQVDDGREVFESYMEVLAELEMHGFEVKAIAERLEKLLSIKD 129

Query: 486 TKLQLDEKLKQI 521
              +L+++ K++
Sbjct: 130 RCKRLEDEAKKV 141


>ref|XP_002512653.1| hypothetical protein RCOM_1438010 [Ricinus communis]
           gi|223548614|gb|EEF50105.1| hypothetical protein
           RCOM_1438010 [Ricinus communis]
          Length = 241

 Score =  105 bits (261), Expect = 6e-21
 Identities = 63/166 (37%), Positives = 101/166 (60%), Gaps = 4/166 (2%)
 Frame = +3

Query: 36  KQHTFSSSMENTSTEASSK---GKATENGEREIAKQAFLIDQNSDNEVLENDNLPFIKTY 206
           K+ + ++ ME+ +T+A S    GK     E     Q+ +I      E++EN  +PF+K+ 
Sbjct: 3   KEVSMAAVMESCNTQALSTCFPGKRERKVEN--FNQSSVITVPEATELVENLEMPFLKSS 60

Query: 207 SGWKELESMEVFRSMPQKPHFGSLQNQPELLREGQAVGLMISFAKLVEKTSKLQIDEPKC 386
             WK +ES+EVF+ +PQ+PHF  L    E  REG A+G M+SFA L+EK SKL++D+ + 
Sbjct: 61  LIWKNIESLEVFQVLPQRPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKLRVDDGRE 120

Query: 387 VLENILEVLPHFEA-CFDVGPIRALLKELLRVKDTKLQLDEKLKQI 521
           V E+ +EVL   E   F+V  I   L++LL +KD   +L+++ K++
Sbjct: 121 VFESYMEVLADLEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKV 166


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
           gi|223545236|gb|EEF46744.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 689

 Score =  105 bits (261), Expect = 6e-21
 Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
 Frame = +3

Query: 24  VSLDKQHTFSSSMENTSTEASSKGKATENGEREIAKQAFLIDQNSDNEVLENDNLPFIKT 203
           ++ + Q   S+ + N      S  K     E    KQ+ +I+     E++E+  +PF+K+
Sbjct: 450 INQEMQTNCSTDLRNNVVSPLSLSKRERKVEN--FKQSSVINVPEATELVEDLEMPFLKS 507

Query: 204 YSGWKELESMEVFRSMPQKPHFGSLQNQPELLREGQAVGLMISFAKLVEKTSKLQIDEPK 383
              WK +ES+EVF+ +PQKPHF  L    E  REG A+G M+SFA L+EK SKL++D+ +
Sbjct: 508 SLIWKNIESLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKLRVDDGR 567

Query: 384 CVLENILEVLPHFEA-CFDVGPIRALLKELLRVKDTKLQLDEKLKQI 521
            V E+ +EVL   E   F+V  I   L++LL +KD   +L+++ K++
Sbjct: 568 EVFESYMEVLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKV 614


>ref|XP_002302785.1| predicted protein [Populus trichocarpa] gi|222844511|gb|EEE82058.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score =  104 bits (260), Expect = 8e-21
 Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
 Frame = +3

Query: 72   STEASSKGKATENGEREIAKQAFLIDQNSDNEVLENDNLPFIKTYSGWKELESMEVFRSM 251
            ST   + G +    ++ +A Q+  +D  S++ ++EN  +PF+K    W  +ESMEVF+ +
Sbjct: 691  STGRIASGVSEAREKKVVAVQSCTVDPKSNDTMVENQLVPFVKKSPVWNTIESMEVFQII 750

Query: 252  PQKPHFGSLQNQPELLREGQAVGLMISFAKLVEKTSKLQIDEPKCVLENILEVLPHFEA- 428
            PQKPHF  L    E  REG A+G+M++FA L EK S LQ D+ + +LE+ LE L   E  
Sbjct: 751  PQKPHFHPLTECKEEYREGSAIGIMVTFASLFEKISSLQFDDCRSILESTLESLVDLEKH 810

Query: 429  CFDVGPIRALLKELLRVKD 485
             FD+   R  L ELL +KD
Sbjct: 811  GFDITVPRCRLNELLSIKD 829


>ref|XP_002515641.1| RNA binding protein, putative [Ricinus communis]
           gi|223545235|gb|EEF46743.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 683

 Score =  103 bits (258), Expect = 1e-20
 Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
 Frame = +3

Query: 72  STEASSKGKATENGEREIAKQAFLIDQNSDNEVLENDNLPFIKTYSGWKELESMEVFRSM 251
           ST  S +       + E  KQ+ +I+     E++EN  +PF K+   WK +ES+EVF+ +
Sbjct: 458 STVISMEHLGKRERKVENFKQSSVINVPEATELVENLEMPFFKSSLIWKNIESLEVFQVL 517

Query: 252 PQKPHFGSLQNQPELLREGQAVGLMISFAKLVEKTSKLQIDEPKCVLENILEVLPHFEA- 428
           PQKPHF  L    E  REG A+G M+SFA L+EK SKLQ+D+ + V ++ +EVL   E  
Sbjct: 518 PQKPHFSPLIRHKEESREGMAMGHMLSFAVLIEKMSKLQVDDGREVFDSYMEVLADLEMH 577

Query: 429 CFDVGPIRALLKELLRVKDTKLQLDEKLKQI 521
            F V  I   L++LL +KD   +L+++ K++
Sbjct: 578 GFQVEAIAECLEKLLSIKDRCKRLEDEAKKV 608