BLASTX nr result
ID: Coptis24_contig00030133
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030133 (730 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16457.3| unnamed protein product [Vitis vinifera] 284 2e-74 ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig... 284 2e-74 emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera] 280 3e-73 ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus c... 247 2e-63 ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2... 219 5e-55 >emb|CBI16457.3| unnamed protein product [Vitis vinifera] Length = 1084 Score = 284 bits (726), Expect = 2e-74 Identities = 148/242 (61%), Positives = 180/242 (74%) Frame = -3 Query: 728 MHVLLVYLQSSPPDQRPXXXXXXXXXXXXVEQRKYSIYREEAVDSIAVALECSLTDEKVR 549 MHVLLVYLQSS P+QRP VE RKYSIYREEAVD+I VALE SLTDE VR Sbjct: 827 MHVLLVYLQSSSPEQRPLVAVLLLHLDLLVEPRKYSIYREEAVDAIVVALEGSLTDENVR 886 Query: 548 VLCCRALLILGGHISFSGELVTENWLLRHAGFYDGCNINYVEKVEENFQIDETILLTEEE 369 CCRALLIL GH SFSG++ TE W+L+ AG D +++ E +D TI L EE Sbjct: 887 EKCCRALLILTGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGTISLDAEE 946 Query: 368 MAIEDWWKKLAASLLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEF 189 A E+W++ L+A LLGNG+KSFLE ISKCLG + S LVR CL TVAW+S AL+ +SDAEF Sbjct: 947 QAKEEWFRNLSAVLLGNGQKSFLEAISKCLGSDSSELVRVCLTTVAWLSSALSSLSDAEF 1006 Query: 188 QLSAFTALIPRLKEILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSLA 9 QLSAF+ALI RL++ LEN +Q+EH++LAS +LL+FS+I ECRVL+ TI EEI+VPL+SL Sbjct: 1007 QLSAFSALISRLRDNLENSEQIEHKILASASLLSFSKIPECRVLLMTIAEEIVVPLRSLV 1066 Query: 8 VV 3 V Sbjct: 1067 QV 1068 >ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis vinifera] Length = 1148 Score = 284 bits (726), Expect = 2e-74 Identities = 148/242 (61%), Positives = 180/242 (74%) Frame = -3 Query: 728 MHVLLVYLQSSPPDQRPXXXXXXXXXXXXVEQRKYSIYREEAVDSIAVALECSLTDEKVR 549 MHVLLVYLQSS P+QRP VE RKYSIYREEAVD+I VALE SLTDE VR Sbjct: 891 MHVLLVYLQSSSPEQRPLVAVLLLHLDLLVEPRKYSIYREEAVDAIVVALEGSLTDENVR 950 Query: 548 VLCCRALLILGGHISFSGELVTENWLLRHAGFYDGCNINYVEKVEENFQIDETILLTEEE 369 CCRALLIL GH SFSG++ TE W+L+ AG D +++ E +D TI L EE Sbjct: 951 EKCCRALLILTGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGTISLDAEE 1010 Query: 368 MAIEDWWKKLAASLLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEF 189 A E+W++ L+A LLGNG+KSFLE ISKCLG + S LVR CL TVAW+S AL+ +SDAEF Sbjct: 1011 QAKEEWFRNLSAVLLGNGQKSFLEAISKCLGSDSSELVRVCLTTVAWLSSALSSLSDAEF 1070 Query: 188 QLSAFTALIPRLKEILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSLA 9 QLSAF+ALI RL++ LEN +Q+EH++LAS +LL+FS+I ECRVL+ TI EEI+VPL+SL Sbjct: 1071 QLSAFSALISRLRDNLENSEQIEHKILASASLLSFSKIPECRVLLMTIAEEIVVPLRSLV 1130 Query: 8 VV 3 V Sbjct: 1131 QV 1132 >emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera] Length = 1148 Score = 280 bits (715), Expect = 3e-73 Identities = 146/242 (60%), Positives = 178/242 (73%) Frame = -3 Query: 728 MHVLLVYLQSSPPDQRPXXXXXXXXXXXXVEQRKYSIYREEAVDSIAVALECSLTDEKVR 549 MHVLLVYLQSS P+QRP VE KYSIYREEAVD+I VALE SLTDE VR Sbjct: 891 MHVLLVYLQSSSPEQRPLVAVLLLHLDLLVEPXKYSIYREEAVDAIVVALEGSLTDENVR 950 Query: 548 VLCCRALLILGGHISFSGELVTENWLLRHAGFYDGCNINYVEKVEENFQIDETILLTEEE 369 CCRALLIL GH SFSG++ TE W+L+ AG D +++ E +D TI L EE Sbjct: 951 EKCCRALLILTGHFSFSGDVPTEKWILKPAGPMDSHDLSSCNNEENGLLVDGTISLDAEE 1010 Query: 368 MAIEDWWKKLAASLLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEF 189 A E+W++ L+A LLGNG+KSFLE ISKCLG + LVR CL TVAW+S AL+ +SDAEF Sbjct: 1011 QAKEEWFRNLSAVLLGNGQKSFLEAISKCLGSDSXELVRVCLTTVAWLSSALSSLSDAEF 1070 Query: 188 QLSAFTALIPRLKEILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSLA 9 QLSAF+ALI RL++ LEN +Q+EH++LAS +LL+FS+I ECRVL+ TI EEI+VPL+SL Sbjct: 1071 QLSAFSALISRLRDNLENSEQIEHKILASASLLSFSKIPECRVLLMTIAEEIVVPLRSLV 1130 Query: 8 VV 3 V Sbjct: 1131 QV 1132 >ref|XP_002528126.1| hypothetical protein RCOM_0146510 [Ricinus communis] gi|223532465|gb|EEF34256.1| hypothetical protein RCOM_0146510 [Ricinus communis] Length = 1050 Score = 247 bits (631), Expect = 2e-63 Identities = 132/239 (55%), Positives = 170/239 (71%) Frame = -3 Query: 728 MHVLLVYLQSSPPDQRPXXXXXXXXXXXXVEQRKYSIYREEAVDSIAVALECSLTDEKVR 549 MH+LL+YLQ+SPP+QRP E K+SIYREEAVD+I +ALE SLTDEKV Sbjct: 822 MHILLMYLQNSPPEQRPWVAV---------EHHKFSIYREEAVDAIVMALESSLTDEKVC 872 Query: 548 VLCCRALLILGGHISFSGELVTENWLLRHAGFYDGCNINYVEKVEENFQIDETILLTEEE 369 CRALL LGG S SG+ +TE+W+L+ AGF +N EE+ D++ L EE Sbjct: 873 EKTCRALLALGGRFSASGKSLTESWVLKQAGFNKIYELN---SHEEDSLCDDSFSLEGEE 929 Query: 368 MAIEDWWKKLAASLLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEF 189 +W + L+ASLLGNG+KSFLE ISKCL + +L+ CL T+AW+S AL+ +SDAEF Sbjct: 930 ETTNEWLRNLSASLLGNGKKSFLEAISKCLASGNLNLIEACLATIAWLSSALSALSDAEF 989 Query: 188 QLSAFTALIPRLKEILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSL 12 LSAF+ALI LKE LENG+Q+E +VLAS++L+NFS+I ECRVL+ TI EEI VPL++L Sbjct: 990 HLSAFSALISGLKESLENGEQIELKVLASMSLINFSKIPECRVLLMTIAEEIAVPLRAL 1048 >ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1| predicted protein [Populus trichocarpa] Length = 1159 Score = 219 bits (558), Expect = 5e-55 Identities = 123/242 (50%), Positives = 159/242 (65%) Frame = -3 Query: 728 MHVLLVYLQSSPPDQRPXXXXXXXXXXXXVEQRKYSIYREEAVDSIAVALECSLTDEKVR 549 M +LLVYLQSSP ++ P VE RKYSIYR+EAVD+I++ALE SLTDEKVR Sbjct: 906 MDILLVYLQSSPAEE-PLVAVLILHLDLLVEPRKYSIYRKEAVDAISMALESSLTDEKVR 964 Query: 548 VLCCRALLILGGHISFSGELVTENWLLRHAGFYDGCNINYVEKVEENFQIDETILLTEEE 369 CRAL +LGG S SG TE+W+L+ AGF +N E+N +D+ + +EE Sbjct: 965 EQSCRALNVLGGIFSASGNSSTESWILKQAGFDKNHEVN---SREDNLLLDDPLSPEDEE 1021 Query: 368 MAIEDWWKKLAASLLGNGRKSFLEIISKCLGCEDSSLVRTCLVTVAWMSRALTKMSDAEF 189 + E+W + L+ SLL NG+ S LE ISKCL LVR CL T+AW+S ++ + D+E Sbjct: 1022 ESSEEWLRNLSESLLANGKMSILETISKCLSSGILDLVRACLTTIAWLSCGISLLPDSEL 1081 Query: 188 QLSAFTALIPRLKEILENGDQVEHRVLASLALLNFSRISECRVLMRTIGEEIMVPLQSLA 9 QL F LI LKEILE+ +Q+EH+VLAS++LLN S+ EC L+ I EEI VPLQSLA Sbjct: 1082 QLFGFPTLISGLKEILEDDEQIEHQVLASMSLLNLSKNPECGSLLMIIAEEISVPLQSLA 1141 Query: 8 VV 3 V Sbjct: 1142 EV 1143