BLASTX nr result

ID: Coptis24_contig00030132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030132
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531408.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_002266853.1| PREDICTED: uncharacterized protein LOC100251...    60   2e-07
ref|XP_004155348.1| PREDICTED: uncharacterized LOC101211725 [Cuc...    59   5e-07
ref|XP_004135230.1| PREDICTED: uncharacterized protein LOC101211...    59   5e-07
ref|XP_003532032.1| PREDICTED: uncharacterized protein LOC100778...    57   2e-06

>ref|XP_002531408.1| conserved hypothetical protein [Ricinus communis]
           gi|223529001|gb|EEF30992.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 162

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
 Frame = +3

Query: 126 KAISSNTLLLNDTSTQCKYVYPDPVPEFAQTETLKFRSELRKNLWTNKE-FGDDLDKVVS 302
           K ISSNT+    T +   YVY DP+PEFAQ+ET KFR+E+ K L  +K+ FG DLDKVV 
Sbjct: 37  KPISSNTV--GATPSFQNYVYSDPIPEFAQSETEKFRAEILKKLSKDKQTFGGDLDKVVD 94

Query: 303 VCEE 314
           VC E
Sbjct: 95  VCSE 98


>ref|XP_002266853.1| PREDICTED: uncharacterized protein LOC100251854 [Vitis vinifera]
           gi|296086501|emb|CBI32090.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +3

Query: 165 STQCKYVYPDPVPEFAQTETLKFRSELRKNLWTNKE-FGDDLDKVVSVCEE 314
           ST  KYVYPDP+PEFA+ ET KFR EL K L   K+ F DDL  VV+VC +
Sbjct: 72  STPQKYVYPDPIPEFAEAETEKFRVELLKKLSKEKDTFRDDLHAVVAVCAQ 122


>ref|XP_004155348.1| PREDICTED: uncharacterized LOC101211725 [Cucumis sativus]
          Length = 170

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +3

Query: 138 SNTLLLNDTSTQCKYVYPDPVPEFAQTETLKFRSELRKNLWTNKE-FGDDLDKVVSVCEE 314
           +++++   T     YVYP+P+PEFA+ ET KF+ +L K L  ++E FG+D D VV VC +
Sbjct: 46  TSSVIYRATPITASYVYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSK 105


>ref|XP_004135230.1| PREDICTED: uncharacterized protein LOC101211725 [Cucumis sativus]
          Length = 170

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +3

Query: 138 SNTLLLNDTSTQCKYVYPDPVPEFAQTETLKFRSELRKNLWTNKE-FGDDLDKVVSVCEE 314
           +++++   T     YVYP+P+PEFA+ ET KF+ +L K L  ++E FG+D D VV VC +
Sbjct: 46  TSSVIYRATPITASYVYPEPIPEFAEVETQKFKEQLSKKLAKDRETFGNDFDSVVDVCSK 105


>ref|XP_003532032.1| PREDICTED: uncharacterized protein LOC100778043 [Glycine max]
          Length = 163

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
 Frame = +3

Query: 126 KAISSN--TLLLNDTSTQCKYVYPDPVPEFAQTETLKFRSELRKNLWTN--KEFGDDLDK 293
           K IS N  T  L  + T   +VYPDPVPEFA+ ET KF+ EL + L  +   EFGDDLD 
Sbjct: 36  KPISRNSFTCALTHSPTHT-HVYPDPVPEFAEHETHKFKVELFRKLSEDDVDEFGDDLDA 94

Query: 294 VVSVCEE 314
           VV+VC +
Sbjct: 95  VVAVCAQ 101


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