BLASTX nr result
ID: Coptis24_contig00030125
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00030125 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27547.3| unnamed protein product [Vitis vinifera] 138 5e-31 ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3... 138 5e-31 ref|XP_002312645.1| multidrug resistance protein ABC transporter... 134 8e-30 ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 133 2e-29 ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3... 133 2e-29 >emb|CBI27547.3| unnamed protein product [Vitis vinifera] Length = 1363 Score = 138 bits (347), Expect = 5e-31 Identities = 71/92 (77%), Positives = 78/92 (84%) Frame = +2 Query: 2 LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181 L APS+ ALFATVLVMV N+PLA+ QE+L SKIMEAKDSR+KATSETLKSMRVLKLHSW Sbjct: 409 LGAAPSMTALFATVLVMVGNTPLAKRQERLHSKIMEAKDSRIKATSETLKSMRVLKLHSW 468 Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277 E TFL KI ELR+TER WLKRYLY +AV L Sbjct: 469 EDTFLNKIKELRETERHWLKRYLYTCSAVAFL 500 >ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1462 Score = 138 bits (347), Expect = 5e-31 Identities = 71/92 (77%), Positives = 78/92 (84%) Frame = +2 Query: 2 LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181 L APS+ ALFATVLVMV N+PLA+ QE+L SKIMEAKDSR+KATSETLKSMRVLKLHSW Sbjct: 422 LGAAPSMTALFATVLVMVGNTPLAKRQERLHSKIMEAKDSRIKATSETLKSMRVLKLHSW 481 Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277 E TFL KI ELR+TER WLKRYLY +AV L Sbjct: 482 EDTFLNKIKELRETERHWLKRYLYTCSAVAFL 513 >ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222852465|gb|EEE90012.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1361 Score = 134 bits (337), Expect = 8e-30 Identities = 66/92 (71%), Positives = 81/92 (88%) Frame = +2 Query: 2 LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181 L APSIAAL +T+LVMVSN+PLA QE+L S+IMEAKDSR+KATSETLKSMRVLKL+SW Sbjct: 298 LGAAPSIAALSSTILVMVSNTPLASKQERLHSRIMEAKDSRIKATSETLKSMRVLKLYSW 357 Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277 E TFLKK+L+LR+TER+WL++YLY +A+ L Sbjct: 358 EPTFLKKLLQLRETERNWLRKYLYTSSAIAFL 389 >ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 3-like [Cucumis sativus] Length = 1444 Score = 133 bits (334), Expect = 2e-29 Identities = 64/92 (69%), Positives = 76/92 (82%) Frame = +2 Query: 2 LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181 L APSI AL AT+ +MVSN+PLA +QE L SKIM+AKDSR+K TSETLK+MRVLKLHSW Sbjct: 388 LGAAPSITALLATIFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSW 447 Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277 E TFLKK+L+LR+ ERSWLKRYLY + + L Sbjct: 448 EQTFLKKVLKLREVERSWLKRYLYTCSVIAFL 479 >ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus] Length = 1444 Score = 133 bits (334), Expect = 2e-29 Identities = 64/92 (69%), Positives = 76/92 (82%) Frame = +2 Query: 2 LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181 L APSI AL AT+ +MVSN+PLA +QE L SKIM+AKDSR+K TSETLK+MRVLKLHSW Sbjct: 388 LGAAPSITALLATIFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSW 447 Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277 E TFLKK+L+LR+ ERSWLKRYLY + + L Sbjct: 448 EQTFLKKVLKLREVERSWLKRYLYTCSVIAFL 479