BLASTX nr result

ID: Coptis24_contig00030125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030125
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27547.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   138   5e-31
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   134   8e-30
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   133   2e-29
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3...   133   2e-29

>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/92 (77%), Positives = 78/92 (84%)
 Frame = +2

Query: 2   LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181
           L  APS+ ALFATVLVMV N+PLA+ QE+L SKIMEAKDSR+KATSETLKSMRVLKLHSW
Sbjct: 409 LGAAPSMTALFATVLVMVGNTPLAKRQERLHSKIMEAKDSRIKATSETLKSMRVLKLHSW 468

Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277
           E TFL KI ELR+TER WLKRYLY  +AV  L
Sbjct: 469 EDTFLNKIKELRETERHWLKRYLYTCSAVAFL 500


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/92 (77%), Positives = 78/92 (84%)
 Frame = +2

Query: 2   LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181
           L  APS+ ALFATVLVMV N+PLA+ QE+L SKIMEAKDSR+KATSETLKSMRVLKLHSW
Sbjct: 422 LGAAPSMTALFATVLVMVGNTPLAKRQERLHSKIMEAKDSRIKATSETLKSMRVLKLHSW 481

Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277
           E TFL KI ELR+TER WLKRYLY  +AV  L
Sbjct: 482 EDTFLNKIKELRETERHWLKRYLYTCSAVAFL 513


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1361

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/92 (71%), Positives = 81/92 (88%)
 Frame = +2

Query: 2   LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181
           L  APSIAAL +T+LVMVSN+PLA  QE+L S+IMEAKDSR+KATSETLKSMRVLKL+SW
Sbjct: 298 LGAAPSIAALSSTILVMVSNTPLASKQERLHSRIMEAKDSRIKATSETLKSMRVLKLYSW 357

Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277
           E TFLKK+L+LR+TER+WL++YLY  +A+  L
Sbjct: 358 EPTFLKKLLQLRETERNWLRKYLYTSSAIAFL 389


>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
           3-like [Cucumis sativus]
          Length = 1444

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/92 (69%), Positives = 76/92 (82%)
 Frame = +2

Query: 2   LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181
           L  APSI AL AT+ +MVSN+PLA +QE L SKIM+AKDSR+K TSETLK+MRVLKLHSW
Sbjct: 388 LGAAPSITALLATIFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSW 447

Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277
           E TFLKK+L+LR+ ERSWLKRYLY  + +  L
Sbjct: 448 EQTFLKKVLKLREVERSWLKRYLYTCSVIAFL 479


>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
          Length = 1444

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/92 (69%), Positives = 76/92 (82%)
 Frame = +2

Query: 2   LSCAPSIAALFATVLVMVSNSPLARIQEKLESKIMEAKDSRMKATSETLKSMRVLKLHSW 181
           L  APSI AL AT+ +MVSN+PLA +QE L SKIM+AKDSR+K TSETLK+MRVLKLHSW
Sbjct: 388 LGAAPSITALLATIFIMVSNTPLANVQESLHSKIMDAKDSRIKLTSETLKNMRVLKLHSW 447

Query: 182 ETTFLKKILELRQTERSWLKRYLYLRAAVVVL 277
           E TFLKK+L+LR+ ERSWLKRYLY  + +  L
Sbjct: 448 EQTFLKKVLKLREVERSWLKRYLYTCSVIAFL 479


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