BLASTX nr result

ID: Coptis24_contig00030121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030121
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285822.1| PREDICTED: uncharacterized protein LOC100245...   193   1e-47
ref|XP_002513847.1| conserved hypothetical protein [Ricinus comm...   188   4e-46
ref|XP_002302266.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
ref|XP_002306599.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_002529532.1| conserved hypothetical protein [Ricinus comm...   180   1e-43

>ref|XP_002285822.1| PREDICTED: uncharacterized protein LOC100245399 [Vitis vinifera]
           gi|302141891|emb|CBI19094.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  193 bits (490), Expect = 1e-47
 Identities = 92/107 (85%), Positives = 103/107 (96%)
 Frame = -2

Query: 324 MDPSSTSSVNGFYSFLTRGIDDLECLFLSTNFMSIQFLQRVLTLLRSFHSQLTILVQKLH 145
           MDPS T+SVNGFYSFLTRGIDDLE +FLSTNFMSIQFLQRVL+LLRSFHSQLT+LVQKLH
Sbjct: 1   MDPSPTNSVNGFYSFLTRGIDDLERVFLSTNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 144 LPIGEKWLDEYMDESSRLWEACLVIKSGISGMENYYSTGVDVASSLD 4
           LP+GEKWLDEYMDESS+LWEAC V+KSGISGMENYYS G+++A+SLD
Sbjct: 61  LPVGEKWLDEYMDESSKLWEACHVLKSGISGMENYYSAGLNIAASLD 107


>ref|XP_002513847.1| conserved hypothetical protein [Ricinus communis]
           gi|223546933|gb|EEF48430.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 320

 Score =  188 bits (477), Expect = 4e-46
 Identities = 89/107 (83%), Positives = 101/107 (94%)
 Frame = -2

Query: 324 MDPSSTSSVNGFYSFLTRGIDDLECLFLSTNFMSIQFLQRVLTLLRSFHSQLTILVQKLH 145
           MDPSST+SVNGFYSFLTRGIDDLE ++LS NFMSIQFLQRVL+LLRSFHSQLT+LVQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 144 LPIGEKWLDEYMDESSRLWEACLVIKSGISGMENYYSTGVDVASSLD 4
           LP+G+KWLDEYMDESS+LWEAC V+KSGISGMEN+YS G ++ SSLD
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGISGMENFYSAGFNITSSLD 107


>ref|XP_002302266.1| predicted protein [Populus trichocarpa] gi|222843992|gb|EEE81539.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/107 (81%), Positives = 101/107 (94%)
 Frame = -2

Query: 324 MDPSSTSSVNGFYSFLTRGIDDLECLFLSTNFMSIQFLQRVLTLLRSFHSQLTILVQKLH 145
           MDPSST+SVNGFYSFLTRGIDDLE ++L+ NFMSIQFLQRVL+LLRSFHSQLT+LVQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVYLANNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 144 LPIGEKWLDEYMDESSRLWEACLVIKSGISGMENYYSTGVDVASSLD 4
           LP+G+KWLDEYMDESS+LWEAC V+KSG+SG+ENYYS G ++ SSLD
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGVSGIENYYSAGFNITSSLD 107


>ref|XP_002306599.1| predicted protein [Populus trichocarpa] gi|222856048|gb|EEE93595.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/107 (79%), Positives = 100/107 (93%)
 Frame = -2

Query: 324 MDPSSTSSVNGFYSFLTRGIDDLECLFLSTNFMSIQFLQRVLTLLRSFHSQLTILVQKLH 145
           MDPSS +S+NGFYSFLTRGIDDLE ++LS NFMSIQFLQRVL+LLRSFHSQLT+LVQKLH
Sbjct: 1   MDPSSANSLNGFYSFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 144 LPIGEKWLDEYMDESSRLWEACLVIKSGISGMENYYSTGVDVASSLD 4
           LP+G+KWLDEYMDESS+LWEAC V+KSG+SG+ENYYS G ++ SSL+
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGLSGIENYYSAGFNITSSLE 107


>ref|XP_002529532.1| conserved hypothetical protein [Ricinus communis]
           gi|223530980|gb|EEF32835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 319

 Score =  180 bits (456), Expect = 1e-43
 Identities = 87/110 (79%), Positives = 101/110 (91%), Gaps = 2/110 (1%)
 Frame = -2

Query: 324 MDPS--STSSVNGFYSFLTRGIDDLECLFLSTNFMSIQFLQRVLTLLRSFHSQLTILVQK 151
           MDPS  +T+SVNGFYSFLTRG+DDL+  FLS NFMSIQFLQ VL+ L+SFHSQLTILVQ+
Sbjct: 1   MDPSCTTTTSVNGFYSFLTRGLDDLDRCFLSNNFMSIQFLQSVLSSLQSFHSQLTILVQR 60

Query: 150 LHLPIGEKWLDEYMDESSRLWEACLVIKSGISGMENYYSTGVDVASSLDG 1
           LHLPIGEKWLDEYMDESSRLWEAC+++KSG+SGMEN YS+G ++ASSLDG
Sbjct: 61  LHLPIGEKWLDEYMDESSRLWEACVIMKSGVSGMENIYSSGANIASSLDG 110


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