BLASTX nr result

ID: Coptis24_contig00030110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030110
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
tpg|DAA38869.1| TPA: hypothetical protein ZEAMMB73_975829 [Zea m...    56   3e-06
ref|XP_003598938.1| hypothetical protein MTR_3g023670 [Medicago ...    56   3e-06
ref|XP_003609461.1| hypothetical protein MTR_4g115940 [Medicago ...    56   4e-06

>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/85 (34%), Positives = 47/85 (55%)
 Frame = +2

Query: 86  KTQIFQRINKQWREFKSKLRSKHYDKCDTDLERIRNCPGGVPHKDWVIFVGNQSTPNAQA 265
           KT + + +  +WR +K+KL+S+HY    TD ER+ +    V  + W I +   ++  AQ 
Sbjct: 75  KTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLPEQWAILISYWNSEEAQL 134

Query: 266 RHSKGKSAREALKTPHTYGRRGAAR 340
           R +K K+ R   K+ HT G +  AR
Sbjct: 135 RSAKNKANRSNQKSTHTAGSKSFAR 159


>tpg|DAA38869.1| TPA: hypothetical protein ZEAMMB73_975829 [Zea mays]
          Length = 462

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
 Frame = +2

Query: 86  KTQIFQRINKQWREFKSKLRSKHYDKCDTDLERIRNCPGGVPHKDWVIFVGNQSTPNAQA 265
           +T + Q I ++WR+ KS L+S  Y   + D     N P GV    WV FV N  TP AQ 
Sbjct: 121 ETWVLQTIGERWRQHKSNLKSIFYPHKNQDANN-SNAPDGVLADQWVAFVNNWMTPKAQD 179

Query: 266 RHSKGKSAREALKTPHTYGRRGAARTNKAMAERSVSLSHQKQSA---SPKVSRPSAARSE 436
                +      K  HT+G +  AR  + + E    + +  ++        S  S  R+ 
Sbjct: 180 LSETNRINCTRRKAVHTFGTKSFARNREDLRENDPEMKYPHRAVLYIHTHTSNISKNRNA 239

Query: 437 DLGSKHILVSFFP 475
            +G    L+S  P
Sbjct: 240 HVGELKALLSQQP 252


>ref|XP_003598938.1| hypothetical protein MTR_3g023670 [Medicago truncatula]
           gi|355487986|gb|AES69189.1| hypothetical protein
           MTR_3g023670 [Medicago truncatula]
          Length = 497

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +2

Query: 86  KTQIFQRINKQWREFKSKLRSKHYDKCDTDLE-RIRNCPGGVPHKDWVIFVGNQSTPNAQ 262
           K+ I   I ++W++ + +L  +HY K D  LE  + N P  +   DW +FV  +  P+ Q
Sbjct: 259 KSYILTSIGRKWKDERCRLFKEHY-KWDLPLEVNLANYPRHIGPTDWALFVAYRRKPDTQ 317

Query: 263 ARHSKGKSAREALKTPHTYGRRGAAR 340
            +  K  + R+ L TPHT G++  AR
Sbjct: 318 KKAQKNVANRKKLTTPHTLGKKSLAR 343


>ref|XP_003609461.1| hypothetical protein MTR_4g115940 [Medicago truncatula]
           gi|355510516|gb|AES91658.1| hypothetical protein
           MTR_4g115940 [Medicago truncatula]
          Length = 491

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
 Frame = +2

Query: 86  KTQIFQRINKQWREFKSKLRSKHYDKCDTDLE-RIRNCPGGVPHKDWVIFVGNQSTPNAQ 262
           K+ I   I ++W++ + +L  +HY K D  LE  + N P  +   DW +FV  +  P+ Q
Sbjct: 253 KSYILTSIGRKWKDERCRLFKEHY-KWDLPLEVNLANYPRHIGPTDWALFVAYRRKPDTQ 311

Query: 263 ARHSKGKSAREALKTPHTYGRRGAAR 340
            +  K  + R+ L TPHT G++  AR
Sbjct: 312 KKARKNVANRKKLTTPHTLGKKSLAR 337


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