BLASTX nr result

ID: Coptis24_contig00030100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030100
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529719.1| PREDICTED: uncharacterized protein LOC100778...   115   4e-24
ref|XP_003604482.1| hypothetical protein MTR_4g012920 [Medicago ...   115   4e-24
ref|XP_003533050.1| PREDICTED: uncharacterized protein LOC100790...   115   5e-24
ref|XP_002279481.2| PREDICTED: uncharacterized protein LOC100243...   113   2e-23
ref|XP_002890095.1| predicted protein [Arabidopsis lyrata subsp....   113   2e-23

>ref|XP_003529719.1| PREDICTED: uncharacterized protein LOC100778731 [Glycine max]
          Length = 1136

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/87 (72%), Positives = 73/87 (83%), Gaps = 3/87 (3%)
 Frame = +2

Query: 32  VRDLVEEAKKRMVLLVTCVVGLSYLMSLTSSSVWVNLPAAASLIFLLRYVSFDLEMRRKA 211
           VRDLVEEAKKR+V+LV CVVGLSYLMSLTSSSVWVNLPAAASLI +LRY+S D EM+RKA
Sbjct: 10  VRDLVEEAKKRIVILVVCVVGLSYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKA 69

Query: 212 AAYNPSA--TN-RVLKQPQEGLKVVSR 283
           AAYN  A  TN +  K+P E  KV+++
Sbjct: 70  AAYNNKAGSTNVQSSKKPVENPKVIAK 96


>ref|XP_003604482.1| hypothetical protein MTR_4g012920 [Medicago truncatula]
           gi|355505537|gb|AES86679.1| hypothetical protein
           MTR_4g012920 [Medicago truncatula]
          Length = 1225

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/87 (68%), Positives = 71/87 (81%), Gaps = 3/87 (3%)
 Frame = +2

Query: 32  VRDLVEEAKKRMVLLVTCVVGLSYLMSLTSSSVWVNLPAAASLIFLLRYVSFDLEMRRKA 211
           VRDLVEEAKKR+V+L+ CVVGLSYLMSLTSSSVWVNLPAAASLI + RY+S D EM+RKA
Sbjct: 11  VRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLIIVFRYLSLDYEMKRKA 70

Query: 212 AAYN---PSATNRVLKQPQEGLKVVSR 283
           AAYN    S +N+  K+P E  K V++
Sbjct: 71  AAYNNKSGSTSNQSSKKPTENAKAVAK 97


>ref|XP_003533050.1| PREDICTED: uncharacterized protein LOC100790491 [Glycine max]
          Length = 1111

 Score =  115 bits (287), Expect = 5e-24
 Identities = 63/87 (72%), Positives = 73/87 (83%), Gaps = 3/87 (3%)
 Frame = +2

Query: 32  VRDLVEEAKKRMVLLVTCVVGLSYLMSLTSSSVWVNLPAAASLIFLLRYVSFDLEMRRKA 211
           VRDLVEEAKKR+V+LV CVVGLSYLMSLTSSSVWVNLPAAASLI +LRY+S D EM+RKA
Sbjct: 10  VRDLVEEAKKRIVILVICVVGLSYLMSLTSSSVWVNLPAAASLIIILRYLSLDFEMKRKA 69

Query: 212 AAYNPSA--TN-RVLKQPQEGLKVVSR 283
           AAYN  A  TN +  K+P E  KV+++
Sbjct: 70  AAYNNKAGSTNVQSSKKPVENHKVIAK 96


>ref|XP_002279481.2| PREDICTED: uncharacterized protein LOC100243006 [Vitis vinifera]
          Length = 1069

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/87 (70%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
 Frame = +2

Query: 32  VRDLVEEAKKRMVLLVTCVVGLSYLMSLTSSSVWVNLPAAASLIFLLRYVSFDLEMRRKA 211
           VRDLVEEAKKR V L  CVVGLSYLMSLTSSSVW NLPAAASLI ++RY+S D EMRRKA
Sbjct: 10  VRDLVEEAKKRFVFLAICVVGLSYLMSLTSSSVWFNLPAAASLIIIIRYLSLDFEMRRKA 69

Query: 212 AAYN--PSATNRV-LKQPQEGLKVVSR 283
           AAYN  PS+ N V  K+  EG K++ +
Sbjct: 70  AAYNSKPSSANTVSQKKSPEGPKIIEK 96


>ref|XP_002890095.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335937|gb|EFH66354.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 949

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/72 (81%), Positives = 64/72 (88%), Gaps = 2/72 (2%)
 Frame = +2

Query: 29  TVRDLVEEAKKRMVLLVTCVVGLSYLMSLTSSSVWVNLPAAASLIFLLRYVSFDLEMRRK 208
           TVRDLVEEAKKR+V+LV CVVGLSYLMSLTSSSVWVNLPAAA LI  LRY SFD+EM+RK
Sbjct: 9   TVRDLVEEAKKRIVILVICVVGLSYLMSLTSSSVWVNLPAAACLIIFLRYFSFDIEMKRK 68

Query: 209 AAAYN--PSATN 238
           AAAYN  PS+ N
Sbjct: 69  AAAYNSKPSSLN 80


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