BLASTX nr result

ID: Coptis24_contig00030097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030097
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39588.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-li...   173   1e-41
emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]   173   1e-41
ref|XP_003558086.1| PREDICTED: peptide chain release factor 2-li...   171   6e-41
ref|XP_002512504.1| peptide chain release factor, putative [Rici...   170   1e-40

>emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/96 (85%), Positives = 93/96 (96%)
 Frame = +3

Query: 6   NERSHHRNKAMAMSVLQSRLDQLEIARQAQLNAQHTESLTEISWGNQIRTYVLHPYRMVK 185
           NERS H+NKA AM+VLQSRLDQLEI+RQAQ+NAQHT+SLT+ISWGNQIRTYVLHPYRMVK
Sbjct: 373 NERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVK 432

Query: 186 DLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEG 293
           DLRTNYEVSDPDSVLEGD+D FI+S+LSAS+DK+EG
Sbjct: 433 DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 468


>ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 434

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/96 (85%), Positives = 93/96 (96%)
 Frame = +3

Query: 6   NERSHHRNKAMAMSVLQSRLDQLEIARQAQLNAQHTESLTEISWGNQIRTYVLHPYRMVK 185
           NERS H+NKA AM+VLQSRLDQLEI+RQAQ+NAQHT+SLT+ISWGNQIRTYVLHPYRMVK
Sbjct: 335 NERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVK 394

Query: 186 DLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEG 293
           DLRTNYEVSDPDSVLEGD+D FI+S+LSAS+DK+EG
Sbjct: 395 DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 430


>emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/96 (85%), Positives = 93/96 (96%)
 Frame = +3

Query: 6   NERSHHRNKAMAMSVLQSRLDQLEIARQAQLNAQHTESLTEISWGNQIRTYVLHPYRMVK 185
           NERS H+NKA AM+VLQSRLDQLEI+RQAQ+NAQHT+SLT+ISWGNQIRTYVLHPYRMVK
Sbjct: 327 NERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVK 386

Query: 186 DLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEG 293
           DLRTNYEVSDPDSVLEGD+D FI+S+LSAS+DK+EG
Sbjct: 387 DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 422


>ref|XP_003558086.1| PREDICTED: peptide chain release factor 2-like [Brachypodium
           distachyon]
          Length = 465

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/98 (81%), Positives = 93/98 (94%)
 Frame = +3

Query: 6   NERSHHRNKAMAMSVLQSRLDQLEIARQAQLNAQHTESLTEISWGNQIRTYVLHPYRMVK 185
           NERS H NKA AM+VLQSRLDQLEI RQAQ+NA+HT+SL+EISWGNQIR+YVLHPYRMVK
Sbjct: 368 NERSQHMNKASAMAVLQSRLDQLEITRQAQMNAEHTQSLSEISWGNQIRSYVLHPYRMVK 427

Query: 186 DLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEEGNL 299
           DLRTNYEVSDPDSVLEGD+DDFI +FLS+S+DK++GN+
Sbjct: 428 DLRTNYEVSDPDSVLEGDLDDFIFNFLSSSLDKDDGNV 465


>ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
           gi|223548465|gb|EEF49956.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 550

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/95 (86%), Positives = 91/95 (95%)
 Frame = +3

Query: 6   NERSHHRNKAMAMSVLQSRLDQLEIARQAQLNAQHTESLTEISWGNQIRTYVLHPYRMVK 185
           NERS H NKA AM+VLQSRLDQLE+ARQAQ+NAQHT+SLTEISWGNQIRTYVLHPYRMVK
Sbjct: 405 NERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMVK 464

Query: 186 DLRTNYEVSDPDSVLEGDIDDFIMSFLSASIDKEE 290
           DLRTNYEVSDPDSVLEG+ID FI+S+LSAS+DK+E
Sbjct: 465 DLRTNYEVSDPDSVLEGEIDGFILSYLSASLDKDE 499


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