BLASTX nr result

ID: Coptis24_contig00030095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030095
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602055.1| Metal transporter [Medicago truncatula] gi|3...    59   5e-07
ref|XP_003526645.1| PREDICTED: metal transporter Nramp5-like [Gl...    58   9e-07
ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v...    57   2e-06
emb|CAN60104.1| hypothetical protein VITISV_017979 [Vitis vinifera]    57   2e-06

>ref|XP_003602055.1| Metal transporter [Medicago truncatula]
           gi|357520337|ref|XP_003630457.1| Metal transporter
           [Medicago truncatula] gi|355491103|gb|AES72306.1| Metal
           transporter [Medicago truncatula]
           gi|355524479|gb|AET04933.1| Metal transporter [Medicago
           truncatula]
          Length = 542

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = -2

Query: 137 SRRIVSLDVEINNTASTIHQDD---DQRPGWRKFLSYVGPGFLVSLAY 3
           + RIV+++V  ++T S  H D    DQ+PGW+KFL+YVGPGFLVSLAY
Sbjct: 11  NNRIVAVNVTPSSTPSYNHDDSSKQDQKPGWKKFLAYVGPGFLVSLAY 58


>ref|XP_003526645.1| PREDICTED: metal transporter Nramp5-like [Glycine max]
          Length = 544

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
 Frame = -2

Query: 152 GFQLGSRRIVSLDVEINNTAST-IHQD---DDQRPGWRKFLSYVGPGFLVSLAY 3
           G   GS RI +++V  +N  ST  H D   + Q+PGW+KFLSYVGPGFLVSLAY
Sbjct: 11  GVNGGSSRIAAVNVTPSNNLSTPSHHDASSNHQKPGWKKFLSYVGPGFLVSLAY 64


>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
           gi|302141782|emb|CBI18985.3| unnamed protein product
           [Vitis vinifera]
          Length = 542

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = -2

Query: 140 GSRRIVSLDVEI--NNTASTIHQD-DDQRPGWRKFLSYVGPGFLVSLAY 3
           GS+RI +LD     + + +  H D DDQ+PGWRKFL++VGPGFLVSLAY
Sbjct: 12  GSKRIAALDTPPPPSRSHAAHHLDLDDQKPGWRKFLAFVGPGFLVSLAY 60


>emb|CAN60104.1| hypothetical protein VITISV_017979 [Vitis vinifera]
          Length = 1091

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 3/49 (6%)
 Frame = -2

Query: 140 GSRRIVSLDVEI--NNTASTIHQD-DDQRPGWRKFLSYVGPGFLVSLAY 3
           GS+RI +LD     + + +  H D DDQ+PGWRKFL++VGPGFLVSLAY
Sbjct: 12  GSKRIAALDTPPPPSRSHAAHHLDLDDQKPGWRKFLAFVGPGFLVSLAY 60


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