BLASTX nr result

ID: Coptis24_contig00030094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030094
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336549.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_002301796.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
ref|XP_002521804.1| conserved hypothetical protein [Ricinus comm...   187   8e-46
emb|CAN78615.1| hypothetical protein VITISV_003657 [Vitis vinifera]   183   1e-44
ref|XP_002263268.1| PREDICTED: uncharacterized protein LOC100243...   182   2e-44

>ref|XP_002336549.1| predicted protein [Populus trichocarpa] gi|222835936|gb|EEE74357.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/168 (55%), Positives = 120/168 (71%)
 Frame = -1

Query: 511 LFYNRLKCQPFCKLTETAAQIVRNEALAVNASKDIXXXXXXXXXXVASSKELPLRAIFKV 332
           +FY+  K Q FC+LT+TA +I R E  AVNAS  +          +++SK LPLRA+FKV
Sbjct: 81  IFYDPAKSQAFCRLTDTALEISRKEEEAVNASLPLVVDRLVRLLFMSTSKSLPLRAVFKV 140

Query: 331 WRELGLPDDFEKSVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECG 152
           WRELGLPDDFE SVI +NP++F L +  NEP TH+LKLV    D + +++VENWR  EC 
Sbjct: 141 WRELGLPDDFEDSVIVKNPNLFRLCDG-NEPRTHVLKLVGEFPDNHFTAAVENWRVTECC 199

Query: 151 KEDSKYTESQIRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEV 8
           +ED       IR++FKH +PPGMRLS+ FR+KVKEWQSL YLGPYE++
Sbjct: 200 REDCSVDRMDIRYSFKHVYPPGMRLSKTFRAKVKEWQSLPYLGPYEDL 247


>ref|XP_002301796.1| predicted protein [Populus trichocarpa] gi|222843522|gb|EEE81069.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  187 bits (476), Expect = 6e-46
 Identities = 91/168 (54%), Positives = 119/168 (70%)
 Frame = -1

Query: 511 LFYNRLKCQPFCKLTETAAQIVRNEALAVNASKDIXXXXXXXXXXVASSKELPLRAIFKV 332
           +FY+  K Q FC+LT+TA +I R E  AVNAS  +          +++SK LPLRA+FKV
Sbjct: 81  IFYDPAKSQAFCRLTDTALEISRKEEEAVNASLPLVVDRLVRLLFMSTSKSLPLRAVFKV 140

Query: 331 WRELGLPDDFEKSVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECG 152
           WRELGLPDDFE SVI +NP++F L +  NEP TH+LKLV    D + +++VENWR  EC 
Sbjct: 141 WRELGLPDDFEDSVIVKNPNLFRLCDG-NEPRTHVLKLVGEFPDNHFTAAVENWRVTECC 199

Query: 151 KEDSKYTESQIRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEV 8
           +ED       +R++FKH +PPGMRLS+ FR+K KEWQSL YLGPYE++
Sbjct: 200 REDCSVDRMDMRYSFKHVYPPGMRLSKTFRAKAKEWQSLPYLGPYEDL 247


>ref|XP_002521804.1| conserved hypothetical protein [Ricinus communis]
           gi|223539017|gb|EEF40614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  187 bits (475), Expect = 8e-46
 Identities = 92/169 (54%), Positives = 121/169 (71%)
 Frame = -1

Query: 511 LFYNRLKCQPFCKLTETAAQIVRNEALAVNASKDIXXXXXXXXXXVASSKELPLRAIFKV 332
           +FYN    QPFC+LT+ A QI   EA ++ A   +          +++SK LPLRAIFKV
Sbjct: 101 IFYNSTLSQPFCRLTDIALQISCQEAESIKACLPVVVDHLVRLLSMSTSKSLPLRAIFKV 160

Query: 331 WRELGLPDDFEKSVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREECG 152
           WRELGLPDDFE S+I+QNP +F L + A+EPNTHILKLV    D + S++V+ WR  EC 
Sbjct: 161 WRELGLPDDFEDSLISQNPHLFRLCD-AHEPNTHILKLVEEIPDNHFSAAVDIWRVTECC 219

Query: 151 KEDSKYTESQIRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEVG 5
           KED     ++I+F+FKH +PPGMR+S++FR+KVKEWQ L Y+GPYE+VG
Sbjct: 220 KEDCSVDRTEIQFSFKHQYPPGMRVSKNFRAKVKEWQRLPYIGPYEKVG 268


>emb|CAN78615.1| hypothetical protein VITISV_003657 [Vitis vinifera]
          Length = 1831

 Score =  183 bits (464), Expect = 1e-44
 Identities = 95/172 (55%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
 Frame = -1

Query: 511 LFYNRLKCQPFCKLTETAAQIVRNEALAVNASKDIXXXXXXXXXXVAS-SKELPLRAIFK 335
           +FY+  K  PFCKLT+ A +I R EA A+  S  I          +++ +K LPLRAIFK
Sbjct: 98  VFYDPSKSLPFCKLTDAAVEISRLEAAAIRGSMPIVVDRLVRLLSMSTVAKSLPLRAIFK 157

Query: 334 VWRELGLPDDFEKSVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREEC 155
           VWRELGLPDDFE SVI QNP +F L +  NEPNTH+LKLV+     N+ ++VENWR  EC
Sbjct: 158 VWRELGLPDDFEDSVILQNPHLFKLCDG-NEPNTHVLKLVSVVPSGNLRAAVENWRIMEC 216

Query: 154 GKED--SKYTESQIRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEVG 5
            KED  S     ++RF+FKH FPPGMRL ++F++KVKEWQ L Y+GPYEE+G
Sbjct: 217 CKEDCGSSVDPFELRFSFKHGFPPGMRLGKNFKAKVKEWQGLPYVGPYEEMG 268


>ref|XP_002263268.1| PREDICTED: uncharacterized protein LOC100243520 [Vitis vinifera]
          Length = 400

 Score =  182 bits (463), Expect = 2e-44
 Identities = 95/172 (55%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
 Frame = -1

Query: 511 LFYNRLKCQPFCKLTETAAQIVRNEALAVNASKDIXXXXXXXXXXVAS-SKELPLRAIFK 335
           +FY+  K  PFCKLT+ A +I R EA A+  S  I          +++ +K LPLRAIFK
Sbjct: 98  VFYDPSKSLPFCKLTDAAVEISRLEAAAIRGSMPIVVDRLVRLLSMSTVAKSLPLRAIFK 157

Query: 334 VWRELGLPDDFEKSVIAQNPDIFILVNNANEPNTHILKLVARNVDFNMSSSVENWRREEC 155
           VWRELGLPDDFE SVI QNP +F L +  NEPNTH+LKLV+     N+ ++VENWR  EC
Sbjct: 158 VWRELGLPDDFEDSVILQNPHLFKLCDG-NEPNTHVLKLVSVVPSGNLRAAVENWRIMEC 216

Query: 154 GKED--SKYTESQIRFAFKHSFPPGMRLSRDFRSKVKEWQSLAYLGPYEEVG 5
            KED  S     ++RF+FKH FPPGMRL ++F++KVKEWQ L Y+GPYEE+G
Sbjct: 217 CKEDCGSSVDPLELRFSFKHGFPPGMRLGKNFKAKVKEWQRLPYVGPYEEMG 268


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