BLASTX nr result

ID: Coptis24_contig00030088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030088
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300459.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002331783.1| cc-nbs-lrr resistance protein [Populus trich...   102   4e-20
ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trich...   101   5e-20
ref|XP_002335033.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
ref|XP_002332774.1| cc-nbs-lrr resistance protein [Populus trich...   100   1e-19

>ref|XP_002300459.1| predicted protein [Populus trichocarpa] gi|222847717|gb|EEE85264.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/113 (45%), Positives = 74/113 (65%), Gaps = 6/113 (5%)
 Frame = +1

Query: 7   SALPTVAKDIANECKGLPLAIVAVARALRGKDEYLWDNALQQLKESVFSKVTPV------ 168
           S L TVA+++A EC+GLP+A+V V RALRGK    W+ A +QLKES F ++  +      
Sbjct: 17  STLNTVAREVARECQGLPIALVTVGRALRGKSRVQWEVASKQLKESQFVRMEQIDEQNNA 76

Query: 169 FSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLPGEKLLGDGDTI 327
           ++ +K+SY+Y++ EE K CF+ C LFPED+ I +E+L  Y  G  L  D + I
Sbjct: 77  YTCLKLSYDYLKYEETKSCFVLCCLFPEDYDIPIEDLTRYAVGYGLHQDAEPI 129


>ref|XP_002331783.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832242|gb|EEE70719.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1078

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/103 (47%), Positives = 71/103 (68%), Gaps = 6/103 (5%)
 Frame = +1

Query: 7   SALPTVAKDIANECKGLPLAIVAVARALRGKDEYLWDNALQQLKESVFSKVTPV------ 168
           S L TVA+++A EC+GLP+A+V V RALRGK E  W+ A +QLK S F  +  +      
Sbjct: 328 STLNTVAREVARECQGLPIALVTVGRALRGKSEVEWEVAFRQLKNSQFLDMEHIDEQRTA 387

Query: 169 FSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLPG 297
           ++ +K+SY+Y++S+E K+CFL C LFPED+ I +E+L  Y  G
Sbjct: 388 YACLKLSYDYLKSKETKLCFLICCLFPEDYNIPIEDLTRYAVG 430


>ref|XP_002332822.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834210|gb|EEE72687.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 817

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 5/112 (4%)
 Frame = +1

Query: 7   SALPTVAKDIANECKGLPLAIVAVARALRGKDEYLWDNALQQLKESVFSKVTPV-----F 171
           S L TVA+ +A ECKGLP+A+V + RALR K E  W    +QLK S F  +  +     +
Sbjct: 162 STLNTVARKVARECKGLPIALVTLGRALRDKSENQWKRVSKQLKNSQFVDMEQIEEKNAY 221

Query: 172 SSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLPGEKLLGDGDTI 327
           + +K+SY+Y++S+E K+CFL C LFPED+ I +E+L  Y  G  L  DG+ I
Sbjct: 222 ACLKLSYDYLKSKETKLCFLLCCLFPEDYNIPIEDLTRYAVGYGLHQDGEPI 273


>ref|XP_002335033.1| predicted protein [Populus trichocarpa] gi|222832660|gb|EEE71137.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/113 (45%), Positives = 74/113 (65%), Gaps = 6/113 (5%)
 Frame = +1

Query: 7   SALPTVAKDIANECKGLPLAIVAVARALRGKDEYLWDNALQQLKESVFSKVTPV------ 168
           S L TVA+++A EC+GLP+A+V V RALRGK    W+ A +QLKES F ++  +      
Sbjct: 14  STLNTVAREVARECQGLPIALVTVGRALRGKSRVQWEVASKQLKESHFVRMEQIDEQNNA 73

Query: 169 FSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLPGEKLLGDGDTI 327
           ++ +K+SY+Y++ EE K CF+ C LFPED+ I +E+L  Y  G  L  D + I
Sbjct: 74  YTCLKLSYDYLKYEETKSCFVLCCLFPEDYDIPIEDLTRYAVGYGLHQDAEPI 126


>ref|XP_002332774.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834669|gb|EEE73132.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 813

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/113 (44%), Positives = 73/113 (64%), Gaps = 6/113 (5%)
 Frame = +1

Query: 7   SALPTVAKDIANECKGLPLAIVAVARALRGKDEYLWDNALQQLKESVFSKVTPV------ 168
           S L TV +++A EC+GLP+A+V V RALRGK    W+ A +QLKES F ++  +      
Sbjct: 119 STLNTVTREVARECQGLPIALVTVGRALRGKSRVQWEVASKQLKESQFVRMEQIDEQNNA 178

Query: 169 FSSIKMSYNYMQSEEHKMCFLFCSLFPEDFKIDMEELFCYLPGEKLLGDGDTI 327
           ++ +K+SY+Y++ EE K CF+ C LFPED+ I +E+L  Y  G  L  D + I
Sbjct: 179 YTCLKLSYDYLKYEETKSCFVLCCLFPEDYDIPIEDLTRYAVGYGLHQDAEPI 231


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