BLASTX nr result

ID: Coptis24_contig00030073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030073
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330429.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002316927.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
gb|AAG00586.1| cytokinin-specific binding protein 1 [Lupinus lut...    81   8e-14
ref|XP_003527268.1| PREDICTED: S-norcoclaurine synthase-like [Gl...    80   2e-13
ref|XP_003600179.1| Photosystem I P700 chlorophyll a apoprotein ...    74   1e-11

>ref|XP_002330429.1| predicted protein [Populus trichocarpa] gi|222871814|gb|EEF08945.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 39/81 (48%), Positives = 60/81 (74%)
 Frame = -3

Query: 260 LGTIMLFNFGSDVKNVTYQKEKIVEFDEAHHKIAIQVLGGGHLDLGFSSYKTAFHFTEIG 81
           L T+ LFNFG  +K +TYQKE++ EFDE  H+I ++V+ GGHL+ GFS YKT F  T  G
Sbjct: 50  LDTVYLFNFGPGLKTMTYQKERVTEFDEFVHRIGLEVIEGGHLNHGFSHYKTTFQLTSTG 109

Query: 80  DTETQVDISVLYDTKLEKATM 18
           + ET +D+++ Y++++E+ T+
Sbjct: 110 EQETLIDVTISYESQVEEDTV 130


>ref|XP_002316927.1| predicted protein [Populus trichocarpa] gi|222859992|gb|EEE97539.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/73 (52%), Positives = 52/73 (71%)
 Frame = -3

Query: 260 LGTIMLFNFGSDVKNVTYQKEKIVEFDEAHHKIAIQVLGGGHLDLGFSSYKTAFHFTEIG 81
           LGTI LFNFG     VTYQKE++ EFDE+ H+I ++V+ GGHLD GFS +K  F  T  G
Sbjct: 50  LGTIYLFNFGP----VTYQKERVSEFDESVHRIGLEVIEGGHLDHGFSHHKATFQLTSTG 105

Query: 80  DTETQVDISVLYD 42
           + ET +D+++ Y+
Sbjct: 106 EQETLIDVTISYE 118


>gb|AAG00586.1| cytokinin-specific binding protein 1 [Lupinus luteus]
          Length = 158

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/73 (49%), Positives = 51/73 (69%)
 Frame = -3

Query: 260 LGTIMLFNFGSDVKNVTYQKEKIVEFDEAHHKIAIQVLGGGHLDLGFSSYKTAFHFTEIG 81
           +GTI+LF F SDV  V+YQ+EKI E DE  H+I +QV+ GG+L  G S YKT+F  + IG
Sbjct: 50  IGTILLFTFDSDVSPVSYQREKITELDEVTHEIGLQVIEGGYLSQGLSYYKTSFQLSAIG 109

Query: 80  DTETQVDISVLYD 42
           +  T V++ + Y+
Sbjct: 110 ELHTLVNVKIFYE 122


>ref|XP_003527268.1| PREDICTED: S-norcoclaurine synthase-like [Glycine max]
          Length = 154

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
 Frame = -3

Query: 260 LGTIMLFNFGSDVKNVTYQKEKIVEFDEAHHKIAIQVLGGGHLDLGFSSYKTAFHFTEIG 81
           +GTI++FNF SDV + +YQ+EKI EFDE  H+I +QV+ GG+L  G S YKT F  + IG
Sbjct: 50  VGTILIFNFLSDV-SPSYQREKITEFDEISHEIGLQVIEGGYLSQGLSYYKTTFQLSAIG 108

Query: 80  DTETQVDISVLYDTKLE-----KATMALETT 3
           + +T V++ + YD + E     K T   E+T
Sbjct: 109 EDKTLVNVKISYDHESEIEERVKPTKTSEST 139


>ref|XP_003600179.1| Photosystem I P700 chlorophyll a apoprotein [Medicago truncatula]
           gi|355489227|gb|AES70430.1| Photosystem I P700
           chlorophyll a apoprotein [Medicago truncatula]
          Length = 207

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/77 (44%), Positives = 53/77 (68%)
 Frame = -3

Query: 260 LGTIMLFNFGSDVKNVTYQKEKIVEFDEAHHKIAIQVLGGGHLDLGFSSYKTAFHFTEIG 81
           +GTI+L  F S +  V+YQKEKI   D++ H+I +QV+ GG+L+ GFS YKT+F  +   
Sbjct: 50  IGTILLLTFFSGLSPVSYQKEKITVLDDSSHEIGLQVVEGGYLNQGFSFYKTSFKLSTTE 109

Query: 80  DTETQVDISVLYDTKLE 30
           + +T V++ + YD +LE
Sbjct: 110 EDKTMVNVKISYDYELE 126


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