BLASTX nr result

ID: Coptis24_contig00030071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030071
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527487.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
ref|XP_002263699.1| PREDICTED: uncharacterized protein LOC100251...    60   2e-07
ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_003555288.1| PREDICTED: uncharacterized protein LOC100814...    56   3e-06

>ref|XP_002527487.1| conserved hypothetical protein [Ricinus communis]
           gi|223533127|gb|EEF34885.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 902

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/78 (56%), Positives = 55/78 (70%)
 Frame = +1

Query: 1   QRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDSTAVSSPAVADLHD 180
           + DV  +PSLDKFLVKHVSRLE+EVQEAKN RKNDL+E K K NS ST+VS         
Sbjct: 655 KEDVLEVPSLDKFLVKHVSRLEKEVQEAKNRRKNDLVENK-KVNS-STSVSESEKNTSSC 712

Query: 181 MGDSSSEVGKENIGPNKQ 234
            G++++   KEN+  NK+
Sbjct: 713 SGEAAA-AEKENVDMNKE 729



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/92 (44%), Positives = 57/92 (61%)
 Frame = +1

Query: 1   QRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDSTAVSSPAVADLHD 180
           + DV  +PSLDKFLVKHVSRLE+EVQEAK+ RKNDLIE K K NS ++   S    ++  
Sbjct: 570 KEDVLEVPSLDKFLVKHVSRLEKEVQEAKDRRKNDLIENK-KVNSSTSVSESELEKEVLQ 628

Query: 181 MGDSSSEVGKENIGPNKQVNDALCGTIREVVE 276
           +  +S E   ++    +  N A+     +V+E
Sbjct: 629 IRKNSKEFKSDSKELERAPNRAISQRKEDVLE 660



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +1

Query: 13  SGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIE 114
           S LPSLDKFLVKH+++LEREVQEAKNSR+N   E
Sbjct: 418 SELPSLDKFLVKHMTKLEREVQEAKNSRRNGSAE 451


>ref|XP_002263699.1| PREDICTED: uncharacterized protein LOC100251578 [Vitis vinifera]
          Length = 814

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
 Frame = +1

Query: 1   QRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIE------RKSKPNSDSTAVSSPA 162
           ++ V  +PSLDKFLVKHVSRLEREVQEAK+  KN  IE       K K NS S+   S  
Sbjct: 564 KQKVQEVPSLDKFLVKHVSRLEREVQEAKSRSKNCPIEGGNEVTLKKKVNSFSSITHS-- 621

Query: 163 VADLHDMGDSSSEVGKENIGPNKQVN 240
                      +  GKENI  NK+V+
Sbjct: 622 ---------GENVCGKENIDLNKEVD 638


>ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|222846022|gb|EEE83569.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/63 (52%), Positives = 44/63 (69%)
 Frame = +1

Query: 19  LPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDSTAVSSPAVADLHDMGDSSS 198
           LPSLDKFLVKHVS+LEREVQEAK+ RKN+L E  ++ N+D+T      +       +S S
Sbjct: 389 LPSLDKFLVKHVSKLEREVQEAKDRRKNELKE-GNQGNTDTTGDGKVTLDGKKTSSESIS 447

Query: 199 EVG 207
           ++G
Sbjct: 448 DLG 450



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +1

Query: 10  VSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERK 120
           V  +PSLDK LVKHVSRLE+EVQEAKN +KN+ +E +
Sbjct: 539 VPEVPSLDKILVKHVSRLEKEVQEAKNRKKNESVEER 575


>ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|222849573|gb|EEE87120.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = +1

Query: 1   QRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIE--RKSKPNSD 138
           ++DV  +PSLDKFLVKHVS LE+EVQEAKN +KN+ +E  R  K N D
Sbjct: 541 RKDVPEVPSLDKFLVKHVSTLEKEVQEAKNRKKNESVEKGRVEKENVD 588



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 37/43 (86%)
 Frame = +1

Query: 16  GLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDST 144
           GLPSLDKFLVKH+S+LEREVQEAK+ R+N+L +  ++ N+D T
Sbjct: 394 GLPSLDKFLVKHMSKLEREVQEAKDRRRNEL-KAGNQGNTDKT 435


>ref|XP_003555288.1| PREDICTED: uncharacterized protein LOC100814684 [Glycine max]
          Length = 766

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
 Frame = +1

Query: 1   QRDVSGLPSLDKFLVKHVSRLEREVQEAKNSRKNDLIERKSKPNSDSTAVSSPAVADLHD 180
           Q+D   +PSLDK LVKHVSRLE+EVQEAKN    +    K K + D+T        D   
Sbjct: 452 QKDHIEVPSLDKVLVKHVSRLEKEVQEAKNRTIKENRSLKKKADLDTT-----GGLDSTF 506

Query: 181 MGDSSSEVGKENIGPNKQVN------DALCGTIREVV-----EKMHPENHGS 303
             D  +   KENI  N ++N      D L   + + V     EK+H ++ GS
Sbjct: 507 YSDEEALDRKENINSNTEINSGESKDDGLEKILIKPVHRLEREKLHAQSLGS 558


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