BLASTX nr result

ID: Coptis24_contig00030070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030070
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trich...   143   5e-32
emb|CBI17894.3| unnamed protein product [Vitis vinifera]              142   8e-32
ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trich...   137   5e-30
ref|XP_002332952.1| cc-nbs-lrr resistance protein [Populus trich...   134   2e-29
emb|CAN68563.1| hypothetical protein VITISV_012099 [Vitis vinifera]   134   3e-29

>ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838884|gb|EEE77235.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1337

 Score =  143 bits (361), Expect = 5e-32
 Identities = 86/230 (37%), Positives = 138/230 (60%)
 Frame = +3

Query: 183 DILMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 362
           +I++ IV +  + L  P+ RQ+GY++ C  NI+NL+++V  L   KT V   +EE+I + 
Sbjct: 2   EIVISIVAKVAELLVVPIKRQIGYVIDCNTNIQNLKNEVEKLTYAKTRVIHSIEEAISKG 61

Query: 363 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 542
           EE + +V+ WL +V         +VG+ +  K ++ G C D K+RY++ K A ++  V+ 
Sbjct: 62  EEIEVDVENWLGSVDGVIEGGCGVVGDESSKKCFM-GLCPDLKIRYRLGKAAKEELTVVV 120

Query: 543 ELLEKGNFDSVSLARXXXXXXXXXXEYVEGFKSVEWAMDRLMKAVSNEVVKIIGVCGMGG 722
           +L EKG FD VS  R          +Y E F+S    ++ ++ A+ +  V ++GV GMGG
Sbjct: 121 DLQEKGKFDRVSY-RAAPSGIGPVKDY-EAFESRNSVLNDIVDALKDCDVNMVGVYGMGG 178

Query: 723 IGKTTLMKKLNNQLQGDPDQLFKKVIMVTVSSNPDIQKIQDEIAQRLGLE 872
           +GKTTL KK+  Q++    +LF KV++  VS  PDI++IQ EIA  LGL+
Sbjct: 179 VGKTTLAKKVAEQVK--EGRLFDKVVLALVSPTPDIRRIQGEIADGLGLK 226


>emb|CBI17894.3| unnamed protein product [Vitis vinifera]
          Length = 982

 Score =  142 bits (359), Expect = 8e-32
 Identities = 88/232 (37%), Positives = 133/232 (57%), Gaps = 5/232 (2%)
 Frame = +3

Query: 192 MPIVT---EAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 362
           M IVT     G  L  PV  Q+GYLVH K+N+ENL+ QV  LEA + D Q  V  +    
Sbjct: 1   MDIVTFIWGVGTKLWGPVTHQIGYLVHYKKNLENLKAQVEALEALRKDNQESVRAAEMNG 60

Query: 363 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 542
           EE K +VQ WL+   +     ++++ +    K    GCC D   RYK+S++AV+  + I 
Sbjct: 61  EEIKAQVQIWLKGADAAIVEVEKVIDDFKLNKRCFWGCCPDCTSRYKLSRKAVKDAVTIG 120

Query: 543 ELLEKGNFDSVSL--ARXXXXXXXXXXEYVEGFKSVEWAMDRLMKAVSNEVVKIIGVCGM 716
           EL +KG FD VSL   +             E F+S + AM+ +MKA+ ++ V +IGV GM
Sbjct: 121 ELQDKGKFDRVSLQIRKPLEIESMISTGDFEAFESTQQAMNEVMKALRDDNVNVIGVYGM 180

Query: 717 GGIGKTTLMKKLNNQLQGDPDQLFKKVIMVTVSSNPDIQKIQDEIAQRLGLE 872
           GG+GKTT++++++  +Q   D+LF  V+   VS N +++ IQ +IA  L ++
Sbjct: 181 GGVGKTTMVEQVS--VQARRDELFDHVVKAVVSQNINLKMIQGQIADMLAVK 230


>ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834261|gb|EEE72738.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1340

 Score =  137 bits (344), Expect = 5e-30
 Identities = 84/230 (36%), Positives = 134/230 (58%)
 Frame = +3

Query: 183 DILMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 362
           + ++ IV    + L  P+ RQ+GY++ C  NI+NL+++V  L   KT V   +EE+ R  
Sbjct: 2   EFVISIVATVAELLVVPIKRQIGYVLDCNTNIQNLKNEVEKLTDAKTRVNHSIEEARRNG 61

Query: 363 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 542
           EE + +V+ WL +V+        +V + +  K ++ G C D K+RY++ K A ++  V+ 
Sbjct: 62  EEIEVDVENWLTSVNGVIGGGGGVVVDESSKKCFM-GLCPDLKLRYRLGKAAKKELTVVV 120

Query: 543 ELLEKGNFDSVSLARXXXXXXXXXXEYVEGFKSVEWAMDRLMKAVSNEVVKIIGVCGMGG 722
            L EKG FD VS  R          +Y E F+S    ++ ++ A+ +  V ++GV GMGG
Sbjct: 121 NLQEKGKFDRVSY-RAAPSGIGPVKDY-EAFESRNSVLNDIVDALKDCDVNMVGVYGMGG 178

Query: 723 IGKTTLMKKLNNQLQGDPDQLFKKVIMVTVSSNPDIQKIQDEIAQRLGLE 872
           +GKTTL KK+  Q++    +LF KV++  VS  PDI++IQ EIA  LGL+
Sbjct: 179 VGKTTLAKKVAEQVK--EGRLFDKVVLAVVSHTPDIRRIQGEIADGLGLK 226


>ref|XP_002332952.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222834264|gb|EEE72741.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1315

 Score =  134 bits (338), Expect = 2e-29
 Identities = 83/230 (36%), Positives = 135/230 (58%)
 Frame = +3

Query: 183 DILMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 362
           +I++ IV +  + L  P+ RQ+GY+++C  NI+NL+++V  L   +T V   +EE+ R  
Sbjct: 2   EIVISIVAKVAELLVVPIKRQIGYVLNCNTNIQNLKNEVEKLTDARTRVNHSIEEARRNG 61

Query: 363 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQAVQKTLVIK 542
           EE + EV  WL +V          V + +  K ++ G C D K+RY++ K A ++  V+ 
Sbjct: 62  EEIEVEVFNWLGSVDGVIDGGGGGVADESSKKCFM-GLCPDLKIRYRLGKAAKKELTVVV 120

Query: 543 ELLEKGNFDSVSLARXXXXXXXXXXEYVEGFKSVEWAMDRLMKAVSNEVVKIIGVCGMGG 722
           +L EKG FD VS  R          +Y E F+S +  ++ ++ A+ +  V ++GV GM G
Sbjct: 121 DLQEKGRFDRVSY-RAAPSGIGPVKDY-EAFESRDSVLNAIVDALKDGGVNMVGVYGMPG 178

Query: 723 IGKTTLMKKLNNQLQGDPDQLFKKVIMVTVSSNPDIQKIQDEIAQRLGLE 872
           +GKTTL+KK+  Q++    +LF K ++  VS  PDI++IQ EIA  LGL+
Sbjct: 179 VGKTTLVKKVAEQVK--EGRLFDKEVLAVVSHTPDIRRIQGEIADGLGLK 226


>emb|CAN68563.1| hypothetical protein VITISV_012099 [Vitis vinifera]
          Length = 1351

 Score =  134 bits (337), Expect = 3e-29
 Identities = 82/236 (34%), Positives = 135/236 (57%), Gaps = 2/236 (0%)
 Frame = +3

Query: 183 DILMPIVTEAGKSLSDPVWRQVGYLVHCKRNIENLRHQVAGLEAKKTDVQCLVEESIRRL 362
           DI++ +  E  K L DP+ RQ+GYL++ +RNI +L  Q+  L  ++ ++Q  V E+ R+ 
Sbjct: 3   DIVISVAVEVAKCLVDPIKRQLGYLLNYRRNITDLNQQIENLRRERDELQIPVNEAYRQG 62

Query: 363 EEPKREVQQWLETVSSEEAAAKELVGEGNEAKWWIKGCCLDWKVRYKISKQA-VQKTLVI 539
           +E    VQ+WL         + +     NE +      C   K RY++SKQA  Q   ++
Sbjct: 63  DEIFPRVQEWLTYAEGIILESNDF----NEHERKASKSCFYLKSRYQLSKQAEKQAAKIV 118

Query: 540 KELLEKGNFDSVSLARXXXXXXXXXXEYVEGFKSVEWAMDRLMKAVSNEVVKIIGVCGMG 719
            ++ E  NF      R          +  E F+S E   +++M+A+ NE ++++GV GMG
Sbjct: 119 DKIQEARNFGGRVSHRPPPFSSSASFKDYEAFQSRESTFNQIMEALRNEDMRMLGVWGMG 178

Query: 720 GIGKTTLMKKLNNQLQGDPDQLFKKVIMVT-VSSNPDIQKIQDEIAQRLGLEFKPG 884
           G+GKTTL+K++    Q + D+LF KV+MV  +S  P+I +IQ++IA+ LGL+F+ G
Sbjct: 179 GVGKTTLVKQVAQ--QAEEDKLFHKVVMVLHISQTPNITEIQEKIARMLGLKFEAG 232


Top