BLASTX nr result

ID: Coptis24_contig00030065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030065
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516852.1| pax transcription activation domain interact...   119   3e-25
ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229...   114   6e-24
ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cuc...   114   6e-24
ref|XP_004145045.1| PREDICTED: uncharacterized protein LOC101217...   114   6e-24
ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [M...   114   1e-23

>ref|XP_002516852.1| pax transcription activation domain interacting protein, putative
            [Ricinus communis] gi|223543940|gb|EEF45466.1| pax
            transcription activation domain interacting protein,
            putative [Ricinus communis]
          Length = 1178

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = +3

Query: 6    VPDDLLVLSCEEDFAICMPLLEKGVMIYGSELLLNGIVIQKLEYERHRLFTDHVRRTRST 185
            +PDDLL+LSCEED+ +C+P LEKG  +Y SELLLNGIVIQKLEYERH+LF DHV+RTRST
Sbjct: 1102 IPDDLLILSCEEDYGVCVPFLEKGAAVYSSELLLNGIVIQKLEYERHQLFADHVKRTRST 1161

Query: 186  IWLRKG 203
            IWLRKG
Sbjct: 1162 IWLRKG 1167


>ref|XP_004163099.1| PREDICTED: uncharacterized protein LOC101229012 [Cucumis sativus]
          Length = 1163

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/72 (72%), Positives = 63/72 (87%)
 Frame = +3

Query: 3    KVPDDLLVLSCEEDFAICMPLLEKGVMIYGSELLLNGIVIQKLEYERHRLFTDHVRRTRS 182
            ++PDDLLVLSCEED+  C+P LEKG  +Y SELLLNGIV QKLE+ERHR+F DHV+RTRS
Sbjct: 1086 QIPDDLLVLSCEEDYNTCLPFLEKGAAVYSSELLLNGIVTQKLEFERHRIFVDHVKRTRS 1145

Query: 183  TIWLRKGDGHQF 218
            TIWL+K DG++F
Sbjct: 1146 TIWLKK-DGNKF 1156


>ref|XP_004152945.1| PREDICTED: uncharacterized LOC101214290 [Cucumis sativus]
          Length = 917

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/72 (72%), Positives = 63/72 (87%)
 Frame = +3

Query: 3    KVPDDLLVLSCEEDFAICMPLLEKGVMIYGSELLLNGIVIQKLEYERHRLFTDHVRRTRS 182
            ++PDDLLVLSCEED+  C+P LEKG  +Y SELLLNGIV QKLE+ERHR+F DHV+RTRS
Sbjct: 840  QIPDDLLVLSCEEDYNTCLPFLEKGAAVYSSELLLNGIVTQKLEFERHRIFVDHVKRTRS 899

Query: 183  TIWLRKGDGHQF 218
            TIWL+K DG++F
Sbjct: 900  TIWLKK-DGNKF 910


>ref|XP_004145045.1| PREDICTED: uncharacterized protein LOC101217520 [Cucumis sativus]
          Length = 1153

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/72 (72%), Positives = 63/72 (87%)
 Frame = +3

Query: 3    KVPDDLLVLSCEEDFAICMPLLEKGVMIYGSELLLNGIVIQKLEYERHRLFTDHVRRTRS 182
            ++PDDLLVLSCEED+  C+P LEKG  +Y SELLLNGIV QKLE+ERHR+F DHV+RTRS
Sbjct: 1076 QIPDDLLVLSCEEDYNTCLPFLEKGAAVYSSELLLNGIVTQKLEFERHRIFVDHVKRTRS 1135

Query: 183  TIWLRKGDGHQF 218
            TIWL+K DG++F
Sbjct: 1136 TIWLKK-DGNKF 1146


>ref|XP_003594019.1| Mediator of DNA damage checkpoint protein [Medicago truncatula]
            gi|355483067|gb|AES64270.1| Mediator of DNA damage
            checkpoint protein [Medicago truncatula]
          Length = 1155

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/72 (70%), Positives = 62/72 (86%)
 Frame = +3

Query: 3    KVPDDLLVLSCEEDFAICMPLLEKGVMIYGSELLLNGIVIQKLEYERHRLFTDHVRRTRS 182
            K+PDDLL+LSCEED+A C+P LEKG M+Y SELLLNGIV QKLEYERH LF DHV++TRS
Sbjct: 1078 KIPDDLLILSCEEDYASCVPFLEKGAMVYSSELLLNGIVTQKLEYERHLLFADHVKKTRS 1137

Query: 183  TIWLRKGDGHQF 218
            T+WL++ D  +F
Sbjct: 1138 TVWLKR-DNRKF 1148


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