BLASTX nr result

ID: Coptis24_contig00030061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030061
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243...   152   5e-35
ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816...   143   2e-32
ref|XP_002525015.1| conserved hypothetical protein [Ricinus comm...   138   1e-30
ref|XP_003536971.1| PREDICTED: uncharacterized protein LOC100802...   133   2e-29
ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29

>ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243200 [Vitis vinifera]
           gi|147771778|emb|CAN66779.1| hypothetical protein
           VITISV_039550 [Vitis vinifera]
          Length = 141

 Score =  152 bits (384), Expect = 5e-35
 Identities = 84/147 (57%), Positives = 93/147 (63%)
 Frame = -2

Query: 624 MSSKCISSCIHDARVPVRATYVNLYKWPESDAEFVKWVSSNDVHKVTGHKSNTNSSTSPR 445
           MSS CISSC++DARVPVRATYVNLYKWPESDAEF+K VSSN                 PR
Sbjct: 1   MSSVCISSCVNDARVPVRATYVNLYKWPESDAEFIKSVSSN---------------RHPR 45

Query: 444 VVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 265
           VVDSISCRQMYLRSYTFS+KETVPEKT KCF                            +
Sbjct: 46  VVDSISCRQMYLRSYTFSKKETVPEKTIKCFGRVKERVAHGRRRNKGEELHGKRFVVVRK 105

Query: 264 VKEISVAAFYSILNRLLSCSASVDVVD 184
           VKEIS +A Y+I  RLL C+ +VDVVD
Sbjct: 106 VKEISCSALYAIFRRLLYCTTTVDVVD 132


>ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816302 [Glycine max]
          Length = 140

 Score =  143 bits (361), Expect = 2e-32
 Identities = 80/146 (54%), Positives = 90/146 (61%)
 Frame = -2

Query: 624 MSSKCISSCIHDARVPVRATYVNLYKWPESDAEFVKWVSSNDVHKVTGHKSNTNSSTSPR 445
           MSS CIS C++DARVPVRATYVNLYKWPESDAEFV+       H   GH         PR
Sbjct: 1   MSSVCISKCVNDARVPVRATYVNLYKWPESDAEFVRRRGGGS-HVCGGH---------PR 50

Query: 444 VVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 265
           VVDSISCRQMYLRSY FSRKE+VPEKT+KCF                            +
Sbjct: 51  VVDSISCRQMYLRSYKFSRKESVPEKTQKCFGRVKERVKKQGSSQHNHGVGRRKCLVWRK 110

Query: 264 VKEISVAAFYSILNRLLSCSASVDVV 187
           ++EIS AA + I +R LSC ASVDVV
Sbjct: 111 MREISCAALFRIFHRFLSCGASVDVV 136


>ref|XP_002525015.1| conserved hypothetical protein [Ricinus communis]
           gi|223535677|gb|EEF37342.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  138 bits (347), Expect = 1e-30
 Identities = 83/154 (53%), Positives = 94/154 (61%), Gaps = 6/154 (3%)
 Frame = -2

Query: 624 MSSKCISSCIHDAR---VPVRATYVNLYKWPESDAEFVKWVS--SNDVHKVTGHKSNTNS 460
           M+S CIS+C++DAR   VPVRATYVNLYKWPESDAEF+K V      +H   GH      
Sbjct: 1   MTSVCISNCVNDARDPRVPVRATYVNLYKWPESDAEFIKSVRRVGQGLH---GHYGQ--- 54

Query: 459 STSPRVVDSISCRQMYLRSYTFSRKETVPEKTKKCF-XXXXXXXXXXXXXXXXXXXXXXX 283
              PRVVDSISCRQMYLRSYTFSRKE+VPE+TKKC                         
Sbjct: 55  ---PRVVDSISCRQMYLRSYTFSRKESVPERTKKCIGRVKEKVANHGKKIKEKGGRRRNK 111

Query: 282 XXXXXRVKEISVAAFYSILNRLLSCSASVDVVDH 181
                +VKE S  A + I +RLLSC ASVDVVDH
Sbjct: 112 CLVFRKVKEFSCNALFRIFHRLLSCGASVDVVDH 145


>ref|XP_003536971.1| PREDICTED: uncharacterized protein LOC100802203 [Glycine max]
          Length = 141

 Score =  133 bits (335), Expect = 2e-29
 Identities = 79/149 (53%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
 Frame = -2

Query: 624 MSSKCISSCIHDAR---VPVRATYVNLYKWPESDAEFVKWVSSNDVHKVTGHKSNTNSST 454
           MSS C+S C++DAR   VPVRATYVNLYKWPESDAEFV+       H   GH        
Sbjct: 1   MSSVCLSKCVNDARDPRVPVRATYVNLYKWPESDAEFVRRRGGGS-HMCGGH-------- 51

Query: 453 SPRVVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXXXXXXXX 274
            PRVVDSISCRQMYLRSY FSRKE+VPEKT+KCF                          
Sbjct: 52  -PRVVDSISCRQMYLRSYKFSRKESVPEKTQKCF--GRVKERVKKQGRSHHGIRRRKCLV 108

Query: 273 XXRVKEISVAAFYSILNRLLSCSASVDVV 187
             +++EIS AA + I +R LSC ASVDVV
Sbjct: 109 WRKMREISCAALFRIFHRFLSCGASVDVV 137


>ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|222868068|gb|EEF05199.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  133 bits (335), Expect = 2e-29
 Identities = 77/152 (50%), Positives = 92/152 (60%), Gaps = 5/152 (3%)
 Frame = -2

Query: 624 MSSKCISSCIHDAR---VPVRATYVNLYKWPESDAEFVKWVSSNDVHKVTGHKSNTNSST 454
           MSS CIS+C++D R   VPVRA YVNLYKW ESDAE +K V     H + GH        
Sbjct: 1   MSSVCISNCVNDTRDPRVPVRANYVNLYKWSESDAELIKSVRRVAGHGLHGH-------- 52

Query: 453 SPRVVDSISCRQMYLRSYTFSRKETVPEKTKKCF--XXXXXXXXXXXXXXXXXXXXXXXX 280
            PRVVDSISCRQ+YLRSYTFSRKE++PEKTKKCF                          
Sbjct: 53  -PRVVDSISCRQLYLRSYTFSRKESMPEKTKKCFGRVKEKVANHGKKRKDQIKGGRKRKC 111

Query: 279 XXXXRVKEISVAAFYSILNRLLSCSASVDVVD 184
               + KE+S +A + I +RLLSC+A+VDVVD
Sbjct: 112 LVFRKAKEVSCSALFRIFHRLLSCTATVDVVD 143


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