BLASTX nr result

ID: Coptis24_contig00030045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030045
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510742.1| bubr1, putative [Ricinus communis] gi|223551...   147   1e-33
ref|XP_002307827.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|NP_001240240.1| uncharacterized protein LOC100799090 [Glycin...   135   3e-30
ref|XP_003555313.1| PREDICTED: mitotic checkpoint serine/threoni...   131   7e-29
ref|XP_002300613.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29

>ref|XP_002510742.1| bubr1, putative [Ricinus communis] gi|223551443|gb|EEF52929.1|
           bubr1, putative [Ricinus communis]
          Length = 380

 Score =  147 bits (370), Expect = 1e-33
 Identities = 78/137 (56%), Positives = 99/137 (72%), Gaps = 2/137 (1%)
 Frame = -3

Query: 531 KMKQERGHRTPLSVYKDTDANVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNT 352
           K K +R  R+ LS+YKDT+++V+  +QP  SK D  +W  LG R+ERNKEN AIPT W T
Sbjct: 247 KSKPDRAQRSALSIYKDTNSDVLPGHQPGKSKTDFNTWQNLGARAERNKENNAIPTKWTT 306

Query: 351 NKISKKPGSRAVAASASSFIEVFVDEECMQSTVT--SESDKSSMLQLRQGDSRDLKKETE 178
            K+ ++PG RA  A+AS+ IEVFVDEEC++S  +      KSS LQLR  D  D+KKETE
Sbjct: 307 YKVPQRPGPRA-GATASACIEVFVDEECVESDRSHGEGGGKSSTLQLR--DGVDMKKETE 363

Query: 177 LLKEDPLRNFPQNSLPR 127
           LL+E+PLRNFP NSLPR
Sbjct: 364 LLRENPLRNFPSNSLPR 380


>ref|XP_002307827.1| predicted protein [Populus trichocarpa] gi|222857276|gb|EEE94823.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/137 (52%), Positives = 98/137 (71%), Gaps = 2/137 (1%)
 Frame = -3

Query: 531 KMKQERGHRTPLSVYKDTDA-NVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWN 355
           +MK +R  + PLS++KDT + + +  +Q   SK D + W TLG R ER+KEN+A+PT W 
Sbjct: 247 QMKPDRTQKIPLSIFKDTTSIDTMPGHQSGKSKTDLSPWSTLGAREERDKENSALPTKWT 306

Query: 354 TNKISKKPGSRAVAASASSFIEVFVDEECMQSTVTSESD-KSSMLQLRQGDSRDLKKETE 178
           T KI ++PG+R    +AS+ IEVFVDEEC +   + + D KSS L+LRQGD  D+KKET+
Sbjct: 307 TYKIPRRPGARTGGVTASASIEVFVDEECTEMDRSHDHDGKSSTLKLRQGDGLDIKKETD 366

Query: 177 LLKEDPLRNFPQNSLPR 127
           LL+E+PLRNFP  SLPR
Sbjct: 367 LLRENPLRNFPLRSLPR 383


>ref|NP_001240240.1| uncharacterized protein LOC100799090 [Glycine max]
           gi|255642110|gb|ACU21321.1| unknown [Glycine max]
          Length = 384

 Score =  135 bits (341), Expect = 3e-30
 Identities = 72/135 (53%), Positives = 96/135 (71%), Gaps = 2/135 (1%)
 Frame = -3

Query: 525 KQERGHRTPLSVYKDT-DANVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTN 349
           K +R    PLS+YKD+ D      ++P+LS     SW TLG R++RNKEN AIP  W + 
Sbjct: 254 KNDRTRAAPLSIYKDSADTGDTDPHKPDLSH----SWHTLGARADRNKENNAIPGKWKSY 309

Query: 348 KISKKPGSRAVAASASSFIEVFVDEECMQS-TVTSESDKSSMLQLRQGDSRDLKKETELL 172
           KI ++PG+R   A+AS+FI VFVDEEC  S +  +E  KSS L++RQ D ++LK+ETELL
Sbjct: 310 KIPQRPGTRTGGATASAFIPVFVDEECQDSQSKKAEGCKSSNLKIRQEDDKELKRETELL 369

Query: 171 KEDPLRNFPQNSLPR 127
           +++PLRNFPQNSLPR
Sbjct: 370 RKNPLRNFPQNSLPR 384


>ref|XP_003555313.1| PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1
           beta-like [Glycine max]
          Length = 384

 Score =  131 bits (329), Expect = 7e-29
 Identities = 69/135 (51%), Positives = 94/135 (69%), Gaps = 2/135 (1%)
 Frame = -3

Query: 525 KQERGHRTPLSVYKDT-DANVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTN 349
           K +R    PLS+YKD+ D      ++P+ S     SW TLG R++RNKEN AIP  W + 
Sbjct: 254 KNDRTRAAPLSIYKDSADTGDTDPHKPDPSH----SWHTLGARADRNKENNAIPGKWKSY 309

Query: 348 KISKKPGSRAVAASASSFIEVFVDEECMQS-TVTSESDKSSMLQLRQGDSRDLKKETELL 172
           K+ ++PG+R   A+ S+FI VFVDEEC  S +  +E  KSS L++RQ D ++LK+ETELL
Sbjct: 310 KVPQRPGTRVGGATPSAFIPVFVDEECQDSQSKKAEGCKSSSLKIRQEDDKELKRETELL 369

Query: 171 KEDPLRNFPQNSLPR 127
           +++PLRNFPQNSLPR
Sbjct: 370 RKNPLRNFPQNSLPR 384


>ref|XP_002300613.1| predicted protein [Populus trichocarpa] gi|222842339|gb|EEE79886.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/129 (51%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
 Frame = -3

Query: 507 RTPLSVYKDT-DANVIRNNQPELSKMDATSWLTLGTRSERNKENTAIPTTWNTNKISKKP 331
           + PLS++KDT + + +  +Q   +K +   W TLG R ERNKEN+A+PT W T KI ++P
Sbjct: 254 KIPLSIFKDTTNIDAMPGHQSVKAKPELNPWSTLGAREERNKENSAVPTKWTTYKIPQRP 313

Query: 330 GSRAVAASASSFIEVFVDEECMQSTVTSESD-KSSMLQLRQGDSRDLKKETELLKEDPLR 154
           G+R+   +A + IEVFVDEEC +     + D  SS L+LRQGD  D+KKET+LL+E+PLR
Sbjct: 314 GARSGGVTAGASIEVFVDEECSKKVRAHDHDGMSSTLRLRQGDVLDIKKETDLLRENPLR 373

Query: 153 NFPQNSLPR 127
           NFP  SLPR
Sbjct: 374 NFPLRSLPR 382


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