BLASTX nr result

ID: Coptis24_contig00030030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030030
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35071.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002525540.1| conserved hypothetical protein [Ricinus comm...   102   3e-20
ref|XP_002304811.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_003598423.1| hypothetical protein MTR_3g013490 [Medicago ...   100   2e-19
ref|XP_004135531.1| PREDICTED: uncharacterized protein LOC101203...    96   4e-18

>emb|CBI35071.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  110 bits (274), Expect = 2e-22
 Identities = 48/86 (55%), Positives = 68/86 (79%)
 Frame = +3

Query: 48  KRMMLQGLEFLLTGFSSKKERELEMMIRKHGGFIVPDVPQPPTSGQNRRFKWKYQQLPVM 227
           ++++ QGLEFLLTGFSS KE+E+E +IRK+GG ++PD+P P  S + R   +  + LP++
Sbjct: 448 EKLIFQGLEFLLTGFSSCKEKEIEGLIRKYGGIVLPDIPSPSNSRRKRNSNFNQKHLPIV 507

Query: 228 LSTKKLQTSKFLYGCAVNAFVLKENW 305
           L +KKLQT+KFLYGCAVN F+LK +W
Sbjct: 508 LCSKKLQTTKFLYGCAVNTFMLKVDW 533


>ref|XP_002525540.1| conserved hypothetical protein [Ricinus communis]
            gi|223535119|gb|EEF36799.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 991

 Score =  102 bits (254), Expect = 3e-20
 Identities = 45/91 (49%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
 Frame = +3

Query: 36   LKDRKRMMLQGLEFLLTGFSSKKERELEMMIRKHGGFIVPDVPQPPTS-GQNRRFKWKYQ 212
            + D KR++  GL+FLLTGFSS+K+RE+  +I+++GG ++ DVP PP++    R+ +  +Q
Sbjct: 744  VNDMKRLIFHGLQFLLTGFSSRKKREIAGLIQEYGGLVLLDVPSPPSNIRTTRKARSNFQ 803

Query: 213  QLPVMLSTKKLQTSKFLYGCAVNAFVLKENW 305
            +LP+++ +KKLQT+KFLYGCAVN  +LK  W
Sbjct: 804  RLPIVICSKKLQTTKFLYGCAVNTLILKVKW 834


>ref|XP_002304811.1| predicted protein [Populus trichocarpa] gi|222842243|gb|EEE79790.1|
            predicted protein [Populus trichocarpa]
          Length = 1122

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/90 (54%), Positives = 65/90 (72%)
 Frame = +3

Query: 36   LKDRKRMMLQGLEFLLTGFSSKKERELEMMIRKHGGFIVPDVPQPPTSGQNRRFKWKYQQ 215
            +KD KR++  GLEFLLTGFS KKE+E+  +I+ +GG IV D+P  P S   R  +   Q 
Sbjct: 840  IKDAKRLIFHGLEFLLTGFSHKKEKEIIEIIQIYGGMIVLDIPPVPNSRLKRVSRSNLQH 899

Query: 216  LPVMLSTKKLQTSKFLYGCAVNAFVLKENW 305
            LPV++ +KKLQT+KFLYGCA+NA +LK  W
Sbjct: 900  LPVVICSKKLQTTKFLYGCAMNALILKLKW 929


>ref|XP_003598423.1| hypothetical protein MTR_3g013490 [Medicago truncatula]
            gi|355487471|gb|AES68674.1| hypothetical protein
            MTR_3g013490 [Medicago truncatula]
          Length = 1201

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/95 (52%), Positives = 62/95 (65%)
 Frame = +3

Query: 21   LTSYHLKDRKRMMLQGLEFLLTGFSSKKERELEMMIRKHGGFIVPDVPQPPTSGQNRRFK 200
            LT Y    R   + +G EFLLTG SS+KERELE +IR  GG I+ D+P PP S   R   
Sbjct: 947  LTDYCRGARNEFIFRGREFLLTGLSSQKERELEALIRNSGGVILYDIPSPPNSKGKRSST 1006

Query: 201  WKYQQLPVMLSTKKLQTSKFLYGCAVNAFVLKENW 305
                QLP++L  KKLQT+KFLYGCAV A +L+ +W
Sbjct: 1007 LSCLQLPIILCNKKLQTAKFLYGCAVGASILRVDW 1041


>ref|XP_004135531.1| PREDICTED: uncharacterized protein LOC101203785 [Cucumis sativus]
          Length = 1330

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/95 (46%), Positives = 69/95 (72%)
 Frame = +3

Query: 21   LTSYHLKDRKRMMLQGLEFLLTGFSSKKERELEMMIRKHGGFIVPDVPQPPTSGQNRRFK 200
            L S +   RK+++ QG++FL+TGFSS+KE+++  ++  +GG I+PD+P P + GQ +  K
Sbjct: 831  LKSRYCSSRKKLIFQGIQFLVTGFSSRKEKDINGIVCNNGGIILPDIPCPSSRGQ-KMSK 889

Query: 201  WKYQQLPVMLSTKKLQTSKFLYGCAVNAFVLKENW 305
               +  PV+LS+KKLQT KFLYGCAVN+ ++  +W
Sbjct: 890  SDCKGPPVILSSKKLQTKKFLYGCAVNSLIVNVSW 924


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