BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00030017
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22850.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-22
ref|XP_002314968.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002519267.1| pentatricopeptide repeat-containing protein,...   100   9e-20
ref|XP_003589699.1| Pentatricopeptide repeat-containing protein ...   100   2e-19

>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/82 (60%), Positives = 65/82 (79%)
 Frame = +3

Query: 126 KESHVLKRLNHEKDITLAFEFFKSVTTTNSFKHTHLTYQTMIYKLGCENELDGVQYLLQR 305
           KE+ VLKRL HE DITLA E+FKS+  + SFKHT LTYQ MI KL  E E+D VQYLLQ+
Sbjct: 42  KEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQ 101

Query: 306 MNIDGVNCTEDIFITVINCYKK 371
           M ++G++C+ED+FI+VI  Y++
Sbjct: 102 MKLEGISCSEDLFISVIGSYRR 123


>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/82 (60%), Positives = 65/82 (79%)
 Frame = +3

Query: 126 KESHVLKRLNHEKDITLAFEFFKSVTTTNSFKHTHLTYQTMIYKLGCENELDGVQYLLQR 305
           KE+ VLKRL HE DITLA E+FKS+  + SFKHT LTYQ MI KL  E E+D VQYLLQ+
Sbjct: 42  KEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQ 101

Query: 306 MNIDGVNCTEDIFITVINCYKK 371
           M ++G++C+ED+FI+VI  Y++
Sbjct: 102 MKLEGISCSEDLFISVIGSYRR 123


>ref|XP_002314968.1| predicted protein [Populus trichocarpa] gi|222864008|gb|EEF01139.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score =  104 bits (260), Expect = 7e-21
 Identities = 46/82 (56%), Positives = 63/82 (76%)
 Frame = +3

Query: 126 KESHVLKRLNHEKDITLAFEFFKSVTTTNSFKHTHLTYQTMIYKLGCENELDGVQYLLQR 305
           KES VL +L +E +I LA  FFKS+  +NSFKHT LTY TMI +LG E ++DG+QYLLQ 
Sbjct: 39  KESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQL 98

Query: 306 MNIDGVNCTEDIFITVINCYKK 371
           M ++G++C ED+F+ VIN Y++
Sbjct: 99  MKLEGISCNEDLFVIVINAYRR 120


>ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541582|gb|EEF43131.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 665

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/83 (55%), Positives = 64/83 (77%)
 Frame = +3

Query: 126 KESHVLKRLNHEKDITLAFEFFKSVTTTNSFKHTHLTYQTMIYKLGCENELDGVQYLLQR 305
           KES V+ RL  E DI LA  +F+S+  + +F+HT LTYQ MI KLG E ++DGVQYLLQ+
Sbjct: 45  KESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQ 104

Query: 306 MNIDGVNCTEDIFITVINCYKKV 374
           M ++G++C+ED+FI VIN Y++V
Sbjct: 105 MKLEGISCSEDLFINVINTYRRV 127


>ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478747|gb|AES59950.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 806

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 44/81 (54%), Positives = 62/81 (76%)
 Frame = +3

Query: 129 ESHVLKRLNHEKDITLAFEFFKSVTTTNSFKHTHLTYQTMIYKLGCENELDGVQYLLQRM 308
           ESHV+K L  E DI  + E+FKS++ + +FKHTHLTY+TMI KLG  NE+DGV YLLQ+M
Sbjct: 41  ESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQM 100

Query: 309 NIDGVNCTEDIFITVINCYKK 371
            ++ V C++++F  VI CY++
Sbjct: 101 KLENVPCSQELFQFVIKCYRR 121