BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029993
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   258   1e-66
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   256   3e-66
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   253   2e-65
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   251   1e-64
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   251   1e-64

>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  258 bits (659), Expect = 1e-66
 Identities = 122/252 (48%), Positives = 168/252 (66%)
 Frame = -1

Query: 764  MGSLKAPGPDGFQGIFFQSCWDIVGEAVVGCVQHFFQNGILHPKLNETFITLIPKITNPD 585
            +G LKAPGPDG    F+++CWD+VGE V   V    + G +    N+  I LIPK+  P+
Sbjct: 669  IGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPE 728

Query: 584  HISKFRPISLCNFTYKIISKVMANRLK*HLHKIVSPFQGAFVKGRSIGDNVGLASEVFHR 405
             I   RPISLCN  YK++SKV+ANRLK  L  ++SP Q AFV GR I DN+ +A E+ H 
Sbjct: 729  LIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHY 788

Query: 404  MSKMKKQKQGWLALKVDMAKAYDRIEWKFLYQIFEKLGFSRKWRTLINNCLSIVSFRVML 225
            M   +  + G+ A K+DM+KAYDR+EW FL+ +  KLGF   W  LI  C+S V++R+ +
Sbjct: 789  MRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRV 848

Query: 224  NGSPLEHIFPQRGLRQGDPLSPYLFIIVSEALSRLIAKNENNGEISGIKIRRKSPSISHL 45
            NG   E   P+RGLRQGDPLSPYLF++ +E  S L++K E  G + GI+I + +PS+SHL
Sbjct: 849  NGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHL 908

Query: 44   LYVDDLILFCKA 9
            L+ DD ++ C+A
Sbjct: 909  LFADDSLILCRA 920


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  256 bits (655), Expect = 3e-66
 Identities = 122/252 (48%), Positives = 167/252 (66%)
 Frame = -1

Query: 764  MGSLKAPGPDGFQGIFFQSCWDIVGEAVVGCVQHFFQNGILHPKLNETFITLIPKITNPD 585
            +G LKAPGPDG    F+++CWD+VGE V   V    + G +    N+  I LIPK+  P+
Sbjct: 696  IGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPE 755

Query: 584  HISKFRPISLCNFTYKIISKVMANRLK*HLHKIVSPFQGAFVKGRSIGDNVGLASEVFHR 405
             I   RPISLCN  YK++SKV+ANRLK  L  ++SP Q AFV GR I DN+ +A E+ H 
Sbjct: 756  LIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHY 815

Query: 404  MSKMKKQKQGWLALKVDMAKAYDRIEWKFLYQIFEKLGFSRKWRTLINNCLSIVSFRVML 225
            M   +  + G+ A K+DM+KAYDR+EW FL+ +  KLGF   W  LI  C+S V++R+ +
Sbjct: 816  MRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRV 875

Query: 224  NGSPLEHIFPQRGLRQGDPLSPYLFIIVSEALSRLIAKNENNGEISGIKIRRKSPSISHL 45
            NG   E   P RGLRQGDPLSPYLF++ +E  S L++K E  G + GI+I + +PS+SHL
Sbjct: 876  NGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHL 935

Query: 44   LYVDDLILFCKA 9
            L+ DD ++ C+A
Sbjct: 936  LFADDSLILCRA 947


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  253 bits (647), Expect = 2e-65
 Identities = 118/252 (46%), Positives = 176/252 (69%)
 Frame = -1

Query: 764  MGSLKAPGPDGFQGIFFQSCWDIVGEAVVGCVQHFFQNGILHPKLNETFITLIPKITNPD 585
            +G+ +APG DGF   F+   WD++G  V   V+HFF++ ++  ++N+T I LIPKI +P 
Sbjct: 802  IGADRAPGFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPK 861

Query: 584  HISKFRPISLCNFTYKIISKVMANRLK*HLHKIVSPFQGAFVKGRSIGDNVGLASEVFHR 405
            H+S +RPISLC  +YKIISK++  RLK  L  ++S  Q AFV G++I DNV +A E+ H 
Sbjct: 862  HMSDYRPISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHS 921

Query: 404  MSKMKKQKQGWLALKVDMAKAYDRIEWKFLYQIFEKLGFSRKWRTLINNCLSIVSFRVML 225
            +   ++ + G++A+K D++KAYDR+EW FL ++  +LGF+ +W   I  C++ VS+ V++
Sbjct: 922  LKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLI 981

Query: 224  NGSPLEHIFPQRGLRQGDPLSPYLFIIVSEALSRLIAKNENNGEISGIKIRRKSPSISHL 45
            NGSP   IFP RG+RQGDPLSPYLF+  +E LS ++ K E N +I G+KI +   +ISHL
Sbjct: 982  NGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHL 1041

Query: 44   LYVDDLILFCKA 9
            L+ DD + FC+A
Sbjct: 1042 LFADDSLFFCRA 1053


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  251 bits (641), Expect = 1e-64
 Identities = 124/252 (49%), Positives = 165/252 (65%)
 Frame = -1

Query: 764  MGSLKAPGPDGFQGIFFQSCWDIVGEAVVGCVQHFFQNGILHPKLNETFITLIPKITNPD 585
            MGSLKAPGPDG   IF+Q  W IVGE +   V HFF  G +  + N+T I LIPK+  P+
Sbjct: 453  MGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWNQTNICLIPKVERPE 512

Query: 584  HISKFRPISLCNFTYKIISKVMANRLK*HLHKIVSPFQGAFVKGRSIGDNVGLASEVFHR 405
               +FRPISLCN  YKIISK++ANRLK  L  IV+P+Q AFV GR I DN  +A EV + 
Sbjct: 513  QACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLISDNCLIAHEVVNL 572

Query: 404  MSKMKKQKQGWLALKVDMAKAYDRIEWKFLYQIFEKLGFSRKWRTLINNCLSIVSFRVML 225
            + + KK      ALK+DM KAYD+++W FL+ +  ++GF   +R  I  C++ VS+ +++
Sbjct: 573  IKQRKKGTHFLAALKIDMFKAYDKVDWDFLFWLLTQMGFPSFYRQWIMQCVTTVSYSIIV 632

Query: 224  NGSPLEHIFPQRGLRQGDPLSPYLFIIVSEALSRLIAKNENNGEISGIKIRRKSPSISHL 45
            NG P     P  GLRQGDPLS YLFI++ + LSRL+    + G   GIK+ R SP +SHL
Sbjct: 633  NGEPTTRFKPSCGLRQGDPLSSYLFILIMDVLSRLLIDGVSAGSFQGIKLSRSSPVLSHL 692

Query: 44   LYVDDLILFCKA 9
             + DD ++F KA
Sbjct: 693  FFADDSLIFFKA 704


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  251 bits (641), Expect = 1e-64
 Identities = 120/252 (47%), Positives = 167/252 (66%)
 Frame = -1

Query: 764  MGSLKAPGPDGFQGIFFQSCWDIVGEAVVGCVQHFFQNGILHPKLNETFITLIPKITNPD 585
            +G  KAPGPDG    F+++CWDIVG  V+  V+ FF+   + P +N T I +IPKITNP 
Sbjct: 596  IGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPT 655

Query: 584  HISKFRPISLCNFTYKIISKVMANRLK*HLHKIVSPFQGAFVKGRSIGDNVGLASEVFHR 405
             +S +RPI+LCN  YK+ISK + NRLK HL+ IVS  Q AF+ GR I DNV +A EV H 
Sbjct: 656  TLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHS 715

Query: 404  MSKMKKQKQGWLALKVDMAKAYDRIEWKFLYQIFEKLGFSRKWRTLINNCLSIVSFRVML 225
            +   K+  + ++A+K D++KAYDR+EW FL       GF  KW   I   +  V + V++
Sbjct: 716  LKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLI 775

Query: 224  NGSPLEHIFPQRGLRQGDPLSPYLFIIVSEALSRLIAKNENNGEISGIKIRRKSPSISHL 45
            NGSP  +I P RG+RQGDPLSPYLFI+  + LS LI    ++G++ G++I   +P+I+HL
Sbjct: 776  NGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHL 835

Query: 44   LYVDDLILFCKA 9
             + DD + FC+A
Sbjct: 836  QFADDSLFFCQA 847