BLASTX nr result
ID: Coptis24_contig00029988
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029988 (449 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AER38246.1| PME3 [Gossypium barbadense] 242 3e-62 ref|XP_003595386.1| Pectinesterase [Medicago truncatula] gi|3554... 240 8e-62 dbj|BAF42041.1| pectin methylesterase 4 [Pyrus communis] 240 1e-61 gb|AER38245.1| PME4 [Gossypium barbadense] 239 2e-61 gb|AFK36090.1| unknown [Medicago truncatula] 237 6e-61 >gb|AER38246.1| PME3 [Gossypium barbadense] Length = 514 Score = 242 bits (617), Expect = 3e-62 Identities = 114/149 (76%), Positives = 131/149 (87%) Frame = +1 Query: 1 TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180 TF+SATFAV G GFIARDI FENTAGP+KHQAVA RSDSDLSV +RC GYQD+LY H+ Sbjct: 276 TFRSATFAVSGRGFIARDITFENTAGPQKHQAVALRSDSDLSVFFRCAIKGYQDSLYTHT 335 Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360 +RQF+REC ITGTVDFIFG++ VVFQ C+ILAK+GL +Q+N +TA GR DP+Q TGFS+Q Sbjct: 336 MRQFFRECRITGTVDFIFGDASVVFQNCQILAKQGLPNQKNTITAQGRKDPNQPTGFSIQ 395 Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447 FCNISAD+DLLPFVNSTPTYLGRPWK YS Sbjct: 396 FCNISADADLLPFVNSTPTYLGRPWKLYS 424 >ref|XP_003595386.1| Pectinesterase [Medicago truncatula] gi|355484434|gb|AES65637.1| Pectinesterase [Medicago truncatula] Length = 527 Score = 240 bits (613), Expect = 8e-62 Identities = 110/149 (73%), Positives = 132/149 (88%) Frame = +1 Query: 1 TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180 TF+SATFAV G GFIARDI+F+NTAGPEKHQAVA RSDSDLSV YRCG +GYQD+LY H+ Sbjct: 289 TFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHT 348 Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360 +RQF+REC I+GTVDFIFG++ +FQ C+IL KKGL +Q+N +TAHGR DP++ TGFS+Q Sbjct: 349 MRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHGRKDPNEPTGFSIQ 408 Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447 FCNI+AD+DLLP VNST TYLGRPWK+YS Sbjct: 409 FCNITADTDLLPSVNSTYTYLGRPWKEYS 437 >dbj|BAF42041.1| pectin methylesterase 4 [Pyrus communis] Length = 509 Score = 240 bits (612), Expect = 1e-61 Identities = 114/149 (76%), Positives = 130/149 (87%) Frame = +1 Query: 1 TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180 TF+SATFAV G GFIARD+ FENTAGPEKHQAVA RSDSDLSV YRC GYQDTLYAH+ Sbjct: 271 TFRSATFAVSGRGFIARDLTFENTAGPEKHQAVALRSDSDLSVFYRCQIRGYQDTLYAHA 330 Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360 +RQFYR+C I+GTVDFIFG++ VVFQ C+ILAKKGL +Q+N VTA GR DP++ TG S+Q Sbjct: 331 MRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSVTAQGRKDPNEPTGISIQ 390 Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447 FCNI+AD+DLLPFVNST TYLGRPWK YS Sbjct: 391 FCNITADADLLPFVNSTSTYLGRPWKLYS 419 >gb|AER38245.1| PME4 [Gossypium barbadense] Length = 525 Score = 239 bits (609), Expect = 2e-61 Identities = 113/149 (75%), Positives = 128/149 (85%) Frame = +1 Query: 1 TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180 T +SATFAV G GFIARDI FENTAGP+KHQAVA RSDSDLSV +RC GYQD+LY H+ Sbjct: 287 TLRSATFAVSGRGFIARDITFENTAGPQKHQAVALRSDSDLSVFFRCAIKGYQDSLYTHT 346 Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360 +RQFYREC ITGTVDFIFG+ V+FQ C+ILAK+GL SQ+N +TA GR DP+Q TGFS+Q Sbjct: 347 MRQFYRECKITGTVDFIFGDGAVLFQNCQILAKQGLPSQKNTITAQGRKDPNQPTGFSIQ 406 Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447 FCNISAD+DLLP VNSTPTYLGRPWK YS Sbjct: 407 FCNISADTDLLPSVNSTPTYLGRPWKLYS 435 >gb|AFK36090.1| unknown [Medicago truncatula] Length = 451 Score = 237 bits (605), Expect = 6e-61 Identities = 112/149 (75%), Positives = 127/149 (85%) Frame = +1 Query: 1 TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180 TF+SATFAV G GFIARDI+F+NTAG EKHQAVA RSDSDLSV YRCG +GYQD+LY H+ Sbjct: 280 TFRSATFAVSGRGFIARDISFQNTAGAEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHT 339 Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360 +RQFYREC I+GTVDFIFG++ VFQ C+ILAKKG+ Q+N VTA GR DP+Q TGFS Q Sbjct: 340 MRQFYRECKISGTVDFIFGDATAVFQNCQILAKKGMPKQKNTVTAQGRKDPNQPTGFSFQ 399 Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447 FCNISADSDLLP V + PTYLGRPWK YS Sbjct: 400 FCNISADSDLLPSVTTIPTYLGRPWKTYS 428