BLASTX nr result

ID: Coptis24_contig00029988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029988
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER38246.1| PME3 [Gossypium barbadense]                            242   3e-62
ref|XP_003595386.1| Pectinesterase [Medicago truncatula] gi|3554...   240   8e-62
dbj|BAF42041.1| pectin methylesterase 4 [Pyrus communis]              240   1e-61
gb|AER38245.1| PME4 [Gossypium barbadense]                            239   2e-61
gb|AFK36090.1| unknown [Medicago truncatula]                          237   6e-61

>gb|AER38246.1| PME3 [Gossypium barbadense]
          Length = 514

 Score =  242 bits (617), Expect = 3e-62
 Identities = 114/149 (76%), Positives = 131/149 (87%)
 Frame = +1

Query: 1   TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180
           TF+SATFAV G GFIARDI FENTAGP+KHQAVA RSDSDLSV +RC   GYQD+LY H+
Sbjct: 276 TFRSATFAVSGRGFIARDITFENTAGPQKHQAVALRSDSDLSVFFRCAIKGYQDSLYTHT 335

Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360
           +RQF+REC ITGTVDFIFG++ VVFQ C+ILAK+GL +Q+N +TA GR DP+Q TGFS+Q
Sbjct: 336 MRQFFRECRITGTVDFIFGDASVVFQNCQILAKQGLPNQKNTITAQGRKDPNQPTGFSIQ 395

Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447
           FCNISAD+DLLPFVNSTPTYLGRPWK YS
Sbjct: 396 FCNISADADLLPFVNSTPTYLGRPWKLYS 424


>ref|XP_003595386.1| Pectinesterase [Medicago truncatula] gi|355484434|gb|AES65637.1|
           Pectinesterase [Medicago truncatula]
          Length = 527

 Score =  240 bits (613), Expect = 8e-62
 Identities = 110/149 (73%), Positives = 132/149 (88%)
 Frame = +1

Query: 1   TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180
           TF+SATFAV G GFIARDI+F+NTAGPEKHQAVA RSDSDLSV YRCG +GYQD+LY H+
Sbjct: 289 TFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHT 348

Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360
           +RQF+REC I+GTVDFIFG++  +FQ C+IL KKGL +Q+N +TAHGR DP++ TGFS+Q
Sbjct: 349 MRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHGRKDPNEPTGFSIQ 408

Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447
           FCNI+AD+DLLP VNST TYLGRPWK+YS
Sbjct: 409 FCNITADTDLLPSVNSTYTYLGRPWKEYS 437


>dbj|BAF42041.1| pectin methylesterase 4 [Pyrus communis]
          Length = 509

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/149 (76%), Positives = 130/149 (87%)
 Frame = +1

Query: 1   TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180
           TF+SATFAV G GFIARD+ FENTAGPEKHQAVA RSDSDLSV YRC   GYQDTLYAH+
Sbjct: 271 TFRSATFAVSGRGFIARDLTFENTAGPEKHQAVALRSDSDLSVFYRCQIRGYQDTLYAHA 330

Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360
           +RQFYR+C I+GTVDFIFG++ VVFQ C+ILAKKGL +Q+N VTA GR DP++ TG S+Q
Sbjct: 331 MRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSVTAQGRKDPNEPTGISIQ 390

Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447
           FCNI+AD+DLLPFVNST TYLGRPWK YS
Sbjct: 391 FCNITADADLLPFVNSTSTYLGRPWKLYS 419


>gb|AER38245.1| PME4 [Gossypium barbadense]
          Length = 525

 Score =  239 bits (609), Expect = 2e-61
 Identities = 113/149 (75%), Positives = 128/149 (85%)
 Frame = +1

Query: 1   TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180
           T +SATFAV G GFIARDI FENTAGP+KHQAVA RSDSDLSV +RC   GYQD+LY H+
Sbjct: 287 TLRSATFAVSGRGFIARDITFENTAGPQKHQAVALRSDSDLSVFFRCAIKGYQDSLYTHT 346

Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360
           +RQFYREC ITGTVDFIFG+  V+FQ C+ILAK+GL SQ+N +TA GR DP+Q TGFS+Q
Sbjct: 347 MRQFYRECKITGTVDFIFGDGAVLFQNCQILAKQGLPSQKNTITAQGRKDPNQPTGFSIQ 406

Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447
           FCNISAD+DLLP VNSTPTYLGRPWK YS
Sbjct: 407 FCNISADTDLLPSVNSTPTYLGRPWKLYS 435


>gb|AFK36090.1| unknown [Medicago truncatula]
          Length = 451

 Score =  237 bits (605), Expect = 6e-61
 Identities = 112/149 (75%), Positives = 127/149 (85%)
 Frame = +1

Query: 1   TFKSATFAVVGIGFIARDIAFENTAGPEKHQAVAYRSDSDLSVLYRCGFYGYQDTLYAHS 180
           TF+SATFAV G GFIARDI+F+NTAG EKHQAVA RSDSDLSV YRCG +GYQD+LY H+
Sbjct: 280 TFRSATFAVSGRGFIARDISFQNTAGAEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHT 339

Query: 181 LRQFYRECVITGTVDFIFGNSVVVFQGCRILAKKGLSSQQNIVTAHGRIDPDQNTGFSLQ 360
           +RQFYREC I+GTVDFIFG++  VFQ C+ILAKKG+  Q+N VTA GR DP+Q TGFS Q
Sbjct: 340 MRQFYRECKISGTVDFIFGDATAVFQNCQILAKKGMPKQKNTVTAQGRKDPNQPTGFSFQ 399

Query: 361 FCNISADSDLLPFVNSTPTYLGRPWKQYS 447
           FCNISADSDLLP V + PTYLGRPWK YS
Sbjct: 400 FCNISADSDLLPSVTTIPTYLGRPWKTYS 428


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