BLASTX nr result
ID: Coptis24_contig00029984
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029984 (857 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003587346.1| cytochrome c oxidase subunit 1 [Cucurbita pe... 567 e-160 ref|YP_003587228.1| cytochrome c oxidase subunit 1 [Citrullus la... 567 e-160 dbj|BAD83459.2| cytochrome oxidase subunit 1, partial (mitochond... 564 e-159 gb|AAP58356.1| cytoplasmic male sterility-associated cytochrome ... 563 e-158 ref|NP_085587.1| cytochrome c oxidase subunit 1 [Arabidopsis tha... 563 e-158 >ref|YP_003587346.1| cytochrome c oxidase subunit 1 [Cucurbita pepo] gi|259156811|gb|ACV96672.1| cytochrome c oxidase subunit 1 [Cucurbita pepo] Length = 527 Score = 567 bits (1462), Expect = e-160 Identities = 272/273 (99%), Positives = 273/273 (100%) Frame = -3 Query: 855 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 676 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI Sbjct: 254 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 313 Query: 675 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 496 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 373 Query: 495 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNLTFFPMHFL 316 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVNLTFFPMHFL Sbjct: 374 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFL 433 Query: 315 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV 136 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV Sbjct: 434 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV 493 Query: 135 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 37 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV Sbjct: 494 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526 >ref|YP_003587228.1| cytochrome c oxidase subunit 1 [Citrullus lanatus] gi|259156773|gb|ACV96635.1| cytochrome c oxidase subunit 1 [Citrullus lanatus] Length = 527 Score = 567 bits (1462), Expect = e-160 Identities = 272/273 (99%), Positives = 273/273 (100%) Frame = -3 Query: 855 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 676 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI Sbjct: 254 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 313 Query: 675 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 496 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 373 Query: 495 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNLTFFPMHFL 316 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVNLTFFPMHFL Sbjct: 374 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFL 433 Query: 315 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV 136 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV Sbjct: 434 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV 493 Query: 135 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 37 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV Sbjct: 494 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526 >dbj|BAD83459.2| cytochrome oxidase subunit 1, partial (mitochondrion) [Nicotiana tabacum] Length = 527 Score = 564 bits (1454), Expect = e-159 Identities = 270/273 (98%), Positives = 272/273 (99%) Frame = -3 Query: 855 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 676 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI Sbjct: 254 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 313 Query: 675 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 496 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 373 Query: 495 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNLTFFPMHFL 316 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVN+TFFPMHFL Sbjct: 374 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNMTFFPMHFL 433 Query: 315 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV 136 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSG NKRCAPSPWAV Sbjct: 434 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGKNKRCAPSPWAV 493 Query: 135 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 37 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV Sbjct: 494 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526 >gb|AAP58356.1| cytoplasmic male sterility-associated cytochrome oxidase subunit I [Brassica juncea] Length = 527 Score = 563 bits (1452), Expect = e-158 Identities = 270/273 (98%), Positives = 272/273 (99%) Frame = -3 Query: 855 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 676 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI Sbjct: 254 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 313 Query: 675 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 496 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 373 Query: 495 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNLTFFPMHFL 316 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVNLTFFPMHFL Sbjct: 374 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFL 433 Query: 315 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV 136 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA+ Sbjct: 434 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAL 493 Query: 135 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 37 E NSTTLEWMVQSPPAFHTFGELPAIKETKSYV Sbjct: 494 ELNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526 >ref|NP_085587.1| cytochrome c oxidase subunit 1 [Arabidopsis thaliana] gi|112253911|ref|YP_717165.1| cytochrome c oxidase subunit 1 [Brassica napus] gi|353526416|ref|YP_004927488.1| cox1 (mitochondrion) [Brassica oleracea] gi|353526497|ref|YP_004927568.1| cox1 (mitochondrion) [Brassica carinata] gi|353526672|ref|YP_004927841.1| cox1 (mitochondrion) [Brassica rapa subsp. campestris] gi|353531355|ref|YP_004927744.1| cox1 (mitochondrion) [Brassica juncea] gi|404481670|ref|YP_006666004.1| cytochrome c oxidase subunit 1 (mitochondrion) [Raphanus sativus] gi|45593157|sp|P60620.1|COX1_ARATH RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I gi|45593158|sp|P60621.1|COX1_RAPSA RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I gi|297416|emb|CAA40873.1| cytochrome c oxidase subunit I [Raphanus sativus] gi|1785788|emb|CAA69785.1| cytochrome c oxidase subunit 1 [Arabidopsis thaliana] gi|31790107|gb|AAP58355.1| cytochrome oxidase subunit I [Brassica juncea] gi|37591113|dbj|BAC98915.1| cytochrome c oxidase subunit 1 [Brassica napus] gi|335354860|gb|AEH43416.1| cox1 [Brassica rapa subsp. campestris] gi|335354961|gb|AEH43516.1| cox1 [Brassica oleracea] gi|335355028|gb|AEH43582.1| cox1 [Brassica carinata] gi|335355088|gb|AEH43641.1| cox1 [Brassica juncea] gi|339511287|emb|CBX48342.1| cox1 [Brassica napus] gi|339773248|gb|AEK01272.1| cox1 [Arabidopsis thaliana] gi|339773256|gb|AEK01279.1| cox1 [Arabidopsis thaliana] gi|339773308|gb|AEK01330.1| cox1 [Arabidopsis thaliana] gi|400278288|dbj|BAM36212.1| cytochrome c oxidase subunit 1 (mitochondrion) [Raphanus sativus] gi|400278324|dbj|BAM36247.1| cytochrome c oxidase subunit 1 (mitochondrion) [Raphanus sativus] Length = 527 Score = 563 bits (1452), Expect = e-158 Identities = 270/273 (98%), Positives = 272/273 (99%) Frame = -3 Query: 855 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 676 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI Sbjct: 254 FGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMI 313 Query: 675 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 496 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY Sbjct: 314 IAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTY 373 Query: 495 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGKIHFWITFFGVNLTFFPMHFL 316 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLG+IHFWITFFGVNLTFFPMHFL Sbjct: 374 YVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFL 433 Query: 315 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAV 136 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWA+ Sbjct: 434 GLSGMPRRIPDYPDAYAGWNALSSFGSYISVVGICCFFVVVTITLSSGNNKRCAPSPWAL 493 Query: 135 EQNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 37 E NSTTLEWMVQSPPAFHTFGELPAIKETKSYV Sbjct: 494 ELNSTTLEWMVQSPPAFHTFGELPAIKETKSYV 526