BLASTX nr result

ID: Coptis24_contig00029982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029982
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541834.1| PREDICTED: uncharacterized protein LOC100803...    57   4e-06

>ref|XP_003541834.1| PREDICTED: uncharacterized protein LOC100803849 [Glycine max]
          Length = 1856

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 50/136 (36%), Positives = 63/136 (46%), Gaps = 25/136 (18%)
 Frame = -3

Query: 777 SLIHSIRFISIMRIRKKRLDSICEKEYTLXXXXXXNHSHXXXXXXXXXXELMMIRRSSRV 598
           SL  S R  S +R + KRLD+ICE+EY+         +               +RRSSRV
Sbjct: 7   SLGSSSRSGSRLRKKHKRLDAICEEEYSRNHGELNEDNGDLNPDAG-------VRRSSRV 59

Query: 597 RKAPVLLDLTPEPVKKRRKV--------IIGTGNTSSPDLSSG--WKLRLR----NSG-- 466
           R+AP+LLD +P P KKRRKV        + G       +  SG  W  RLR    N G  
Sbjct: 60  RRAPMLLDASPAPPKKRRKVGKGGIGRIVEGARRLGRENKGSGGAWSSRLRSRVGNVGVR 119

Query: 465 ---------GKRKLFD 445
                    GKRKLF+
Sbjct: 120 VKEERESPRGKRKLFE 135


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