BLASTX nr result
ID: Coptis24_contig00029971
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029971 (450 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515954.1| hypothetical protein RCOM_1488230 [Ricinus c... 72 6e-11 ref|XP_002298247.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 >ref|XP_002515954.1| hypothetical protein RCOM_1488230 [Ricinus communis] gi|223544859|gb|EEF46374.1| hypothetical protein RCOM_1488230 [Ricinus communis] Length = 454 Score = 71.6 bits (174), Expect = 6e-11 Identities = 53/146 (36%), Positives = 69/146 (47%), Gaps = 18/146 (12%) Frame = +3 Query: 66 IKASSHSVLKHSLKEG-NENSQTMGSSRLQNPSPKKSI-----PSMHFMSPTVSASSKV- 224 I +SS S S+ +G +EN ++ L + KKS P FMSPT+SA+SK Sbjct: 8 ISSSSTSNKPPSIPKGTDENEESYHDKGLNVQNLKKSTATTPAPIKQFMSPTISAASKAN 67 Query: 225 --KKKILVERNEAASTH---------SSVDXXXXXXXXXXXXXXXXXXXXXNQCHDFESS 371 +KKIL ERN++ T+ S D S Sbjct: 68 PPRKKILAERNDSQDTYPQKTQNFDSKSTQKATNPDSRITSSIEFGDNQENALIDDLSSR 127 Query: 372 PYNPLTNYLSPRPQFLLYNPNKRVEI 449 PY+PLTNYLSPRP+FL Y PN+R EI Sbjct: 128 PYDPLTNYLSPRPKFLRYKPNRRREI 153 >ref|XP_002298247.1| predicted protein [Populus trichocarpa] gi|222845505|gb|EEE83052.1| predicted protein [Populus trichocarpa] Length = 418 Score = 60.5 bits (145), Expect = 1e-07 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 6/122 (4%) Frame = +3 Query: 102 LKEGNENSQTMGSSRLQNPSPKKSIPSM---HFMSPTVSASSKV---KKKILVERNEAAS 263 L+ +EN Q+ L +PKK + + HFMSPT+SA+SK ++KIL E N + Sbjct: 54 LQGTDENDQSYQGRSLNVQNPKKPLTTTSTKHFMSPTISAASKANPPRRKILAESNGSLD 113 Query: 264 THSSVDXXXXXXXXXXXXXXXXXXXXXNQCHDFESSPYNPLTNYLSPRPQFLLYNPNKRV 443 TH + S PY+PLT+Y+SPRP FL Y PN+ Sbjct: 114 TH--LQKTPTFGSKTISSIEFAEYGENVLLDHLSSRPYDPLTSYISPRP-FLRYKPNRHR 170 Query: 444 EI 449 +I Sbjct: 171 DI 172