BLASTX nr result

ID: Coptis24_contig00029970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029970
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284836.1| PREDICTED: heat stress transcription factor ...   230   2e-58
ref|XP_003528294.1| PREDICTED: heat stress transcription factor ...   218   8e-55
gb|ABK95877.1| unknown [Populus trichocarpa]                          217   2e-54
ref|XP_002301176.1| predicted protein [Populus trichocarpa] gi|2...   211   9e-53
ref|XP_003523945.1| PREDICTED: heat stress transcription factor ...   209   4e-52

>ref|XP_002284836.1| PREDICTED: heat stress transcription factor B-4 [Vitis vinifera]
           gi|147768919|emb|CAN66983.1| hypothetical protein
           VITISV_004457 [Vitis vinifera]
          Length = 363

 Score =  230 bits (587), Expect = 2e-58
 Identities = 131/224 (58%), Positives = 151/224 (67%), Gaps = 25/224 (11%)
 Frame = -1

Query: 718 PSFFQYPNRLSISP-DSDEQANWCDSPPLSSPRGI--------GCNNSISALSEDNERLR 566
           P FF +P R+SISP DSD+QANWCDSP LSSP           G N+S++ALSEDNERLR
Sbjct: 139 PGFFPFPGRVSISPPDSDDQANWCDSPTLSSPTAATGVSVVSGGYNSSVTALSEDNERLR 198

Query: 565 RSNSMLISELAHMKKLYNDIIYFVQNHVRPVTPSNSFPSSLLV------AXXXXXXXXXX 404
           RSNS+L+SELAHM+KLYNDIIYFVQNHV+PV PSNS+PSSL++      A          
Sbjct: 199 RSNSILMSELAHMRKLYNDIIYFVQNHVKPVAPSNSYPSSLVICNPPSSATTAAATITCS 258

Query: 403 XXTMFHKPQNHVLGYYQSQPKQQAPHQHINGSFNSHYQMPE-------EPNNNNNSKTKL 245
              M  KP N +LG YQS PK QAP  H  GSFNS             E  N ++ +TKL
Sbjct: 259 STAMVQKPLNQLLGCYQSNPK-QAPRNHGMGSFNSSTTTSSKSSLTVLEETNGSSCRTKL 317

Query: 244 FGVSLFSKKRLHPE---PTSNVETNKARLVLSNDDLGLNLMPPS 122
           FGV L SKKRLHPE    T+++ETNKARLVL  DDLGLNLMPPS
Sbjct: 318 FGVPLQSKKRLHPEYASTTTSMETNKARLVLDKDDLGLNLMPPS 361


>ref|XP_003528294.1| PREDICTED: heat stress transcription factor B-4-like [Glycine max]
           gi|83853831|gb|ABC47863.1| Heat shock transcription
           factor (HSF) [Glycine max]
          Length = 363

 Score =  218 bits (556), Expect = 8e-55
 Identities = 125/220 (56%), Positives = 149/220 (67%), Gaps = 21/220 (9%)
 Frame = -1

Query: 718 PSFFQYPNRLSISP--DSDEQANWCDSPPLSSPRGIG-------CNNSISALSEDNERLR 566
           P+FF + +R+SISP  DSD+QANWCDSPP  S   +         N S++ALSEDNERLR
Sbjct: 142 PTFFPFSSRVSISPSNDSDDQANWCDSPPRGSTSLVNGAAAAANYNTSVTALSEDNERLR 201

Query: 565 RSNSMLISELAHMKKLYNDIIYFVQNHVRPVTPSNSFPSSLLV--AXXXXXXXXXXXXTM 392
           RSN+ML+SELAHMKKLYNDIIYFVQNHV+PV PSNS+ SSLL+               +M
Sbjct: 202 RSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSSSLLLCNTPSATPITSGGNVSM 261

Query: 391 FHKPQNHVLGYYQSQPKQQA-----PHQHI----NGSFNSHYQMPEEPNNNNNS-KTKLF 242
             +P N +LGYY + PKQ A     P  ++      +  S   + E PN+N NS KTKLF
Sbjct: 262 TQRPTNQLLGYYSTNPKQGATQITQPQTYVVNSPTNTSRSSITIVEGPNSNINSCKTKLF 321

Query: 241 GVSLFSKKRLHPEPTSNVETNKARLVLSNDDLGLNLMPPS 122
           GVSL SKKR+HP+  SN ETNKARLVL  DDLGLNLMPPS
Sbjct: 322 GVSLQSKKRVHPDYGSNPETNKARLVLEKDDLGLNLMPPS 361


>gb|ABK95877.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  217 bits (552), Expect = 2e-54
 Identities = 133/226 (58%), Positives = 152/226 (67%), Gaps = 27/226 (11%)
 Frame = -1

Query: 718 PSFFQYPNRLSISP-DSDEQAN--WCDSPPLSSP-RGI----------GCNNSISALSED 581
           PSFF + +R SISP DSDEQAN  WCDSPPL+SP RG+          G N+S+ ALSED
Sbjct: 142 PSFFPFSSRTSISPSDSDEQANNNWCDSPPLTSPPRGVASATVIGGGGGYNSSVFALSED 201

Query: 580 NERLRRSNSMLISELAHMKKLYNDIIYFVQNHVRPVTPSNSFPSSLLV---AXXXXXXXX 410
           NERLRRSN+ML+SELAHMKKLYNDIIYFVQNHV+PV PSNS+ SSLL+   A        
Sbjct: 202 NERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSSSLLLCGPAPYATANPV 261

Query: 409 XXXXTMFHKPQNHVLGYY----QSQPKQQAPHQHINGSFNSHYQMP---EEPNNNNNSKT 251
               ++  KP N +LGYY     + PK QAP  H+  S  +  Q      E  NNN  KT
Sbjct: 262 TSNGSLAQKPLNQLLGYYPTTAPNNPK-QAPQVHVLNSPTTTSQSSLTFLEEANNNGCKT 320

Query: 250 KLFGVSLFSKKRLHPEPTS---NVETNKARLVLSNDDLGLNLMPPS 122
           KLFGV L SKKRLHPE  S   N+ETNKAR+VL  DDLGLNLMPPS
Sbjct: 321 KLFGVPLHSKKRLHPEYGSNPGNMETNKARMVLDKDDLGLNLMPPS 366


>ref|XP_002301176.1| predicted protein [Populus trichocarpa] gi|222842902|gb|EEE80449.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  211 bits (538), Expect = 9e-53
 Identities = 131/228 (57%), Positives = 152/228 (66%), Gaps = 29/228 (12%)
 Frame = -1

Query: 718 PSFFQYPNRLSISP-DSDEQAN-WCDSPPLSSPR------------GIGCNNSISALSED 581
           PSFF +P+R SISP DSDEQAN WCDSPPL+SP             G G N+S+SALSED
Sbjct: 80  PSFFPFPSRTSISPSDSDEQANNWCDSPPLTSPPRGGVATATVIGGGGGFNSSVSALSED 139

Query: 580 NERLRRSNSMLISELAHMKKLYNDIIYFVQNHVRPVTPSNSFPSSLLV---AXXXXXXXX 410
           NERLRRSN+ML+SELAHMKKLYNDIIYFVQNHV+PV PSNS+ SSLL+   +        
Sbjct: 140 NERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSSSLLLCGPSPYATTNHV 199

Query: 409 XXXXTMFHKPQNHVLGYY----QSQPKQQAPHQHI-----NGSFNSHYQMPEEPNNNNNS 257
               ++  KP N +LGYY     + PK Q P  H+       +  S   + EE  NNN  
Sbjct: 200 TSNGSLVQKPLNQLLGYYPTTAPTNPK-QIPQVHVLINSPTTTSQSSLTILEEA-NNNGC 257

Query: 256 KTKLFGVSLFSKKRLHPEPTS---NVETNKARLVLSNDDLGLNLMPPS 122
           KTKLFGVSL +KKRLHPE  S   N+ET+KARLVL  DDLGLNLMP S
Sbjct: 258 KTKLFGVSLQTKKRLHPEYGSNPGNMETSKARLVLDKDDLGLNLMPLS 305


>ref|XP_003523945.1| PREDICTED: heat stress transcription factor B-4-like [Glycine max]
           gi|83853818|gb|ABC47851.1| heat shock transcription
           factor [Glycine max]
          Length = 363

 Score =  209 bits (533), Expect = 4e-52
 Identities = 119/220 (54%), Positives = 147/220 (66%), Gaps = 21/220 (9%)
 Frame = -1

Query: 718 PSFFQYPNRLSISP--DSDEQANWCDSPP------LSSPRGIGCNNSISALSEDNERLRR 563
           P+FF + +R+SIS   DSD+Q+NWCDSPP      ++       N S++ALSEDNERLRR
Sbjct: 142 PTFFPFSSRVSISTSNDSDDQSNWCDSPPRGATSLVNGAAAANYNTSVTALSEDNERLRR 201

Query: 562 SNSMLISELAHMKKLYNDIIYFVQNHVRPVTPSNSFPSSLLV--AXXXXXXXXXXXXTMF 389
           SN+ML+SELAHMKKLYNDIIYFVQNHV+PV PSNS+ SSLL+               +M 
Sbjct: 202 SNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSSSLLLCNTPSATPISSANNVSMM 261

Query: 388 HKPQNHVLGYYQSQPKQQA-----PHQHI----NGSFNSHYQMPEEP--NNNNNSKTKLF 242
            +P N +LGYY + PKQ A     P  ++      +  S   + E P  +N N+ KTKLF
Sbjct: 262 QRPMNQLLGYYSTNPKQGATQITQPQTYVVNSPTNTSRSSITIFEGPASSNINSCKTKLF 321

Query: 241 GVSLFSKKRLHPEPTSNVETNKARLVLSNDDLGLNLMPPS 122
           GVSL SKKR+HP+  SN ETN+ARLVL  DDLGLNLMPPS
Sbjct: 322 GVSLQSKKRVHPDCGSNPETNRARLVLEKDDLGLNLMPPS 361


Top