BLASTX nr result
ID: Coptis24_contig00029965
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029965 (922 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera] 95 3e-17 ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|2... 92 1e-16 ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus c... 88 3e-15 ref|XP_003532753.1| PREDICTED: protein SCAR3-like [Glycine max] 87 5e-15 ref|XP_004161214.1| PREDICTED: protein SCAR3-like [Cucumis sativus] 86 9e-15 >ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera] Length = 1135 Score = 94.7 bits (234), Expect = 3e-17 Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 20/111 (18%) Frame = +1 Query: 589 LLVNGFQKKVSLAHDDTSKPSCIVK--------------------TDLSEHLRHASPTNS 708 LL+NGFQ+ VSL D+ S+P+ K TD + SP NS Sbjct: 730 LLINGFQRNVSLVQDEKSEPASSAKSSAFEETSGHQSVSYQTYPETDFKKQFGRESPINS 789 Query: 709 IPSSPPLEHMKISYHPIDGFEMSKMKLKFHDGHYIHDNNKDAEFPSFQLLP 861 + SSPPLE MKIS+HPI+GFE SK+KLKF DG + +++ +D FPSFQL+P Sbjct: 790 LSSSPPLEQMKISFHPINGFETSKLKLKFPDGSHCNESIRDM-FPSFQLVP 839 >ref|XP_002316825.1| predicted protein [Populus trichocarpa] gi|222859890|gb|EEE97437.1| predicted protein [Populus trichocarpa] Length = 937 Score = 92.4 bits (228), Expect = 1e-16 Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 22/132 (16%) Frame = +1 Query: 538 KGSQDTKVSSSSM--FFPRLLVNGFQKKVSLAHDDTSKPSCIVKTDLSEH-------LRH 690 + SQD +SS F LLVNGF +K+SL HD +P+ +++T E Sbjct: 570 ESSQDNDENSSQRHGFGHGLLVNGFSRKMSLVHDGECEPTRLLRTSTLEQQSWRNEVTHQ 629 Query: 691 ASPT-------------NSIPSSPPLEHMKISYHPIDGFEMSKMKLKFHDGHYIHDNNKD 831 A+P +S+ SSPPLEHMKIS+HPI+GFE SK+KLKF DG++ + + +D Sbjct: 630 ATPEKAYNEQFGSKYSIDSLMSSPPLEHMKISFHPINGFEDSKLKLKFPDGNHCNASIRD 689 Query: 832 AEFPSFQLLPQS 867 FPSFQL+P++ Sbjct: 690 M-FPSFQLIPET 700 >ref|XP_002522581.1| hypothetical protein RCOM_1015180 [Ricinus communis] gi|223538272|gb|EEF39881.1| hypothetical protein RCOM_1015180 [Ricinus communis] Length = 1111 Score = 87.8 bits (216), Expect = 3e-15 Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 22/133 (16%) Frame = +1 Query: 550 DTKVSSSSMFF--PRLLVNGFQKKVSLAHDDTSKPSCIVKTDLSE----HLR-------- 687 + + +SS MF RLL+NGF++K+SL D + + ++T S+ H R Sbjct: 692 ENEKNSSQMFGLGHRLLINGFRRKISLVPDSQCEQASSLRTSASDQRNGHHRITHHAAAD 751 Query: 688 --------HASPTNSIPSSPPLEHMKISYHPIDGFEMSKMKLKFHDGHYIHDNNKDAEFP 843 H + S+ SSPPLEHMKIS+HPID FE SK+ LKF DG++ + + +D FP Sbjct: 752 KTLDGKFGHKTNVGSLTSSPPLEHMKISFHPIDSFEASKLNLKFPDGNHNNGSTRDM-FP 810 Query: 844 SFQLLPQSVYSLQ 882 +FQL+P+ L+ Sbjct: 811 AFQLVPEPTIPLK 823 >ref|XP_003532753.1| PREDICTED: protein SCAR3-like [Glycine max] Length = 1115 Score = 87.0 bits (214), Expect = 5e-15 Identities = 56/132 (42%), Positives = 74/132 (56%), Gaps = 20/132 (15%) Frame = +1 Query: 532 ITKGSQDTKVSSSSMF--FPRLLVNGFQKKVSLAHD------------DTSKPSCIVKTD 669 IT+ +Q +SS +F RLL+N FQ+KVS D S + IV Sbjct: 912 ITEPNQGNGENSSRVFGLSRRLLINSFQRKVSFDEKLERYNSLKSVILDQSGQNGIVGQS 971 Query: 670 L------SEHLRHASPTNSIPSSPPLEHMKISYHPIDGFEMSKMKLKFHDGHYIHDNNKD 831 L E + P S+P SPPLEHMKIS+HP+ G E+SK+KLKF DG H++ KD Sbjct: 972 LPETTTSKEKVGSGYPIKSLPPSPPLEHMKISFHPVSGLEISKLKLKFPDGSNRHESLKD 1031 Query: 832 AEFPSFQLLPQS 867 FPSFQL+P++ Sbjct: 1032 V-FPSFQLVPEA 1042 >ref|XP_004161214.1| PREDICTED: protein SCAR3-like [Cucumis sativus] Length = 1254 Score = 86.3 bits (212), Expect = 9e-15 Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 19/130 (14%) Frame = +1 Query: 547 QDTKVSSSSMFFPRLLVNGFQKKVSLAHDDTSKPSCIV-------------------KTD 669 +D + +S +LLVNGF +K++L HD+ + + + + Sbjct: 846 KDENSNQNSGLSHQLLVNGFHRKLTLIHDERFETTSMTTDGPGKRNANQDTVLQTMYERT 905 Query: 670 LSEHLRHASPTNSIPSSPPLEHMKISYHPIDGFEMSKMKLKFHDGHYIHDNNKDAEFPSF 849 EHL S +S P SPPL+HMKIS+HP+ GFE+SKMKL+F DG + KD FPSF Sbjct: 906 SKEHLGCDSSMDSCPPSPPLDHMKISFHPVSGFEISKMKLRFPDGSEGRGSTKDI-FPSF 964 Query: 850 QLLPQSVYSL 879 QL P+ S+ Sbjct: 965 QLAPEESISV 974