BLASTX nr result

ID: Coptis24_contig00029964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029964
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250...   208   1e-51
ref|XP_002524524.1| conserved hypothetical protein [Ricinus comm...   186   3e-45
ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|2...   186   4e-45
ref|XP_004146089.1| PREDICTED: uncharacterized protein LOC101202...   177   2e-42
ref|XP_003565227.1| PREDICTED: uncharacterized protein LOC100831...   165   9e-39

>ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera]
          Length = 524

 Score =  208 bits (529), Expect = 1e-51
 Identities = 124/226 (54%), Positives = 146/226 (64%), Gaps = 5/226 (2%)
 Frame = -2

Query: 698 CIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNVSGTSAGVPPAQS 519
           CIPKDPAALWN+EFVQAEELF QP  +DNCLRDNRFCG+SNSFV R   G       +Q 
Sbjct: 103 CIPKDPAALWNAEFVQAEELFKQPFAVDNCLRDNRFCGISNSFVKRIAEGAPVSNVASQP 162

Query: 518 KIGGITASCRSSSAVQTPTVPQ-QKAKVQQSSPKIG-HSPVVATPVIKSESTASGSNAQA 345
           K  G+    +S SA QT  V Q Q+ KVQQSSPK+   SP V T V K ES  + ++ QA
Sbjct: 163 KTTGLLGPSKSISAPQTIAVQQPQERKVQQSSPKVSLQSPSVVTDV-KDESNGTRAHDQA 221

Query: 344 H---TNTGKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPTCLPETSKTVTDST 174
                + GK   LPA KKK Q++K SSG  GSLANMWGRASVKSKP+C P          
Sbjct: 222 SKPPADKGKAPPLPANKKKGQNDK-SSGTEGSLANMWGRASVKSKPSCAPV--------- 271

Query: 173 GNLPTAEAQICASEAIDTVSSDDDDVQCVNHKRVTNGKSNRNRRVV 36
            ++ +AEAQICA EA++  SSD+D  Q  N KR +NG   R RRVV
Sbjct: 272 -DVVSAEAQICAREAVEGASSDEDG-QDANFKRASNGDGGRKRRVV 315


>ref|XP_002524524.1| conserved hypothetical protein [Ricinus communis]
           gi|223536198|gb|EEF37851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score =  186 bits (473), Expect = 3e-45
 Identities = 109/223 (48%), Positives = 139/223 (62%), Gaps = 1/223 (0%)
 Frame = -2

Query: 701 PCIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNVSGTSAGVPPAQ 522
           P IPKDPAALWN EFVQAEELF QP+  DNCLRDNRFCG+ N FV RNV+G       +Q
Sbjct: 99  PAIPKDPAALWNDEFVQAEELFRQPNVADNCLRDNRFCGILNPFVKRNVAGNPVSNAVSQ 158

Query: 521 SKIGGITASCRSSSAVQTPTVPQQKAKVQQSSPKIGHSPVVATPVIKSES-TASGSNAQA 345
            K  GI    +S+SA +   VP Q+ K +QS P +G    +    IKSES      +++ 
Sbjct: 159 PKSVGIPEPSKSNSAHENIKVPLQQIKDEQSGPMVGKQSTILVKDIKSESHETEDQSSKP 218

Query: 344 HTNTGKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPTCLPETSKTVTDSTGNL 165
           H    KV  LP  +KK Q +KSSS    SLAN+WGRAS KSK T   +    V++    +
Sbjct: 219 HACGEKV--LPTNEKKGQGDKSSS----SLANLWGRASAKSKLTSAEDNKNLVSNP---I 269

Query: 164 PTAEAQICASEAIDTVSSDDDDVQCVNHKRVTNGKSNRNRRVV 36
            +AEAQ+C+SEAI+  SS  D+ + VN KR +NG+ +R RRVV
Sbjct: 270 ASAEAQVCSSEAIEDQSS-ADEAKGVNFKRTSNGEGSRKRRVV 311


>ref|XP_002331717.1| predicted protein [Populus trichocarpa] gi|222874323|gb|EEF11454.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  186 bits (472), Expect = 4e-45
 Identities = 115/228 (50%), Positives = 135/228 (59%), Gaps = 7/228 (3%)
 Frame = -2

Query: 698 CIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNVSGTSAGVPPAQS 519
           CIPKDPAALWN+EFVQAEELF Q  T+DNCLRDNRFCG+ NSFV  N  G      PA +
Sbjct: 100 CIPKDPAALWNAEFVQAEELFKQSFTVDNCLRDNRFCGILNSFVKYNCDG------PAAT 153

Query: 518 KIGGITASCRSSSAVQTPTVPQQKAKVQQSSPKIGHSPVVATPVIKSESTASGSNAQAHT 339
           K   I          QT T P  K    Q SPK+G         +KSE   +G    A  
Sbjct: 154 KSMEIPV----IQVCQTITAPPSKQTKVQQSPKVGPPSPNLVNSVKSERNGTGVRDLATK 209

Query: 338 NT---GKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPTCLPETSKTVTDSTGN 168
            T    KV+ LPA KKK QS+K+SSG GGSLAN+WGRAS KSKP      S    D+  +
Sbjct: 210 QTVDEEKVSLLPANKKKGQSDKTSSGNGGSLANLWGRASAKSKP------SSAQADNDKH 263

Query: 167 LP----TAEAQICASEAIDTVSSDDDDVQCVNHKRVTNGKSNRNRRVV 36
           +P    +AEAQI A E I+ + S DD+ Q VN KR +NG S+R RRVV
Sbjct: 264 IPNPTVSAEAQISACEEIE-IGSSDDEAQGVNFKRTSNGDSSRKRRVV 310


>ref|XP_004146089.1| PREDICTED: uncharacterized protein LOC101202933 [Cucumis sativus]
           gi|449518067|ref|XP_004166065.1| PREDICTED:
           uncharacterized protein LOC101228942 [Cucumis sativus]
          Length = 520

 Score =  177 bits (449), Expect = 2e-42
 Identities = 106/222 (47%), Positives = 133/222 (59%), Gaps = 2/222 (0%)
 Frame = -2

Query: 695 IPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNVSGTSAGVPPAQSK 516
           IPKDPAALWN+EFVQAEELF QP T DNCLRDNRFCG+SNS+V RNV    A V  +Q K
Sbjct: 104 IPKDPAALWNAEFVQAEELFKQPFTADNCLRDNRFCGISNSYVKRNVDEIPASVAASQPK 163

Query: 515 IGGITASCRSSSAVQTPTVPQ-QKAKVQQSSPKIGHSPVVATPVIKSESTASGSNAQAHT 339
                 S +  ++ Q  TV Q QK+++ + SP +G         +KSE   +   A    
Sbjct: 164 SAVDLESSKKMTSYQNTTVLQPQKSEMPKVSPNVGLQSSTVVKEVKSEGNRTDHQASKPI 223

Query: 338 NT-GKVAALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPTCLPETSKTVTDSTGNLP 162
               KVA+LP  KKK Q +K+ S  G SLAN+WGR   KSK       +   T +   + 
Sbjct: 224 AVKEKVASLPTNKKKGQGDKTCSSTGSSLANLWGRVPTKSKLGDDHADANRATAANPTVS 283

Query: 161 TAEAQICASEAIDTVSSDDDDVQCVNHKRVTNGKSNRNRRVV 36
           +AEAQICA EA+   +SDDD+ Q VN KR +N +S R RRVV
Sbjct: 284 SAEAQICAHEALQIENSDDDE-QDVNIKRSSN-ESGRKRRVV 323


>ref|XP_003565227.1| PREDICTED: uncharacterized protein LOC100831421 [Brachypodium
           distachyon]
          Length = 540

 Score =  165 bits (417), Expect = 9e-39
 Identities = 103/239 (43%), Positives = 128/239 (53%), Gaps = 18/239 (7%)
 Frame = -2

Query: 698 CIPKDPAALWNSEFVQAEELFNQPSTIDNCLRDNRFCGVSNSFVIRNVSGTSAG-VPPAQ 522
           CIPKD A LWN EFVQAEELFNQP   +NCLRDNRFCGV NSFV R   G   G VPP  
Sbjct: 107 CIPKDTAVLWNPEFVQAEELFNQPFDEENCLRDNRFCGVLNSFVKRTTKGKHVGSVPPKP 166

Query: 521 SKIGGITASCRSSSAVQTPTV-------PQQKAKVQQSSPKIGHSPVVATPVIKSESTAS 363
           + I  + A  + SSA +  +V       P+  +  +++S K G  P +  P    + T++
Sbjct: 167 TNIAAVAALSKPSSAPKEQSVIGRQQGLPRPSSPKKETSNKAGRQPGLPGPSSPKKETSN 226

Query: 362 GSNAQAHTNTGKVA----------ALPATKKKPQSEKSSSGAGGSLANMWGRASVKSKPT 213
            +         K A          A+ A K K Q+ K+    GGSLA MWGRAS K K  
Sbjct: 227 KAEKDNIPVLDKTANAPVVKEPSIAIHANKAKAQNGKALPSNGGSLATMWGRASAKPK-- 284

Query: 212 CLPETSKTVTDSTGNLPTAEAQICASEAIDTVSSDDDDVQCVNHKRVTNGKSNRNRRVV 36
             P  +   TD      TA+AQICA E  D  SSDD+  Q V++KR + G SNR RR V
Sbjct: 285 -APAVTNATTDLPSVAVTADAQICAKEEADADSSDDE--QSVHYKRASGGASNRKRRAV 340


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