BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029951
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24978.3| unnamed protein product [Vitis vinifera]              275   3e-72
ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro...   271   7e-71
ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...   264   6e-69
emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]   251   7e-65
ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing pro...   246   2e-63

>emb|CBI24978.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  275 bits (704), Expect = 3e-72
 Identities = 129/184 (70%), Positives = 149/184 (80%)
 Frame = +1

Query: 1   PDMVPLADFDFDESKVVGLVGTRICIWRRHGKRSIFPLHEDTVTSGLCMRYIDPEAVVGC 180
           P++ PL DFDFDE+K+VGL+GTRIC WRR+GKRSIFP  E T   GLCMRYIDPEAVVGC
Sbjct: 155 PNLAPLVDFDFDENKIVGLIGTRICTWRRNGKRSIFPSREGTFMKGLCMRYIDPEAVVGC 214

Query: 181 GDGTARVFDMYSKKCSRIIRMHGGPVTCLALTDDQXXXXXXXXXXXKVAGLSSDQRVASL 360
            DGTARVFDMYS+KCSRIIRMH GPV CLAL+DDQ            ++GLSSDQR+A L
Sbjct: 215 EDGTARVFDMYSRKCSRIIRMHSGPVRCLALSDDQCIISGSSLGSITISGLSSDQRIAKL 274

Query: 361 RSTDSSGIRSLCFNPCSSLVFAGSTSGYLHCWDLRTMKQLWETRASSNVIYSVQHMHNDT 540
           RSTDS+GIR+LCFNP S LVF+GST+GY  CWDLRTM+ LWE R S NVIYS+QH+ +DT
Sbjct: 275 RSTDSTGIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNVIYSMQHLCSDT 334

Query: 541 SSLV 552
            +LV
Sbjct: 335 HTLV 338


>ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Vitis vinifera]
          Length = 421

 Score =  271 bits (692), Expect = 7e-71
 Identities = 129/185 (69%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   PDMVPLADFDFDESKVVGLVGTRICIWRRHGKRSIFPLHEDTVTSGLCMRYIDPEAVVGC 180
           P++ PL DFDFDE+K+VGL+GTRIC WRR+GKRSIFP  E T   GLCMRYIDPEAVVGC
Sbjct: 140 PNLAPLVDFDFDENKIVGLIGTRICTWRRNGKRSIFPSREGTFMKGLCMRYIDPEAVVGC 199

Query: 181 GDGTARVFDMYSKKCSRIIRMHGGPVTCLALTDDQXXXXXXXXXXXKVAGLSSDQRVASL 360
            DGTARVFDMYS+KCSRIIRMH GPV CLAL+DDQ            ++GLSSDQR+A L
Sbjct: 200 EDGTARVFDMYSRKCSRIIRMHSGPVRCLALSDDQCIISGSSLGSITISGLSSDQRIAKL 259

Query: 361 RSTDSS-GIRSLCFNPCSSLVFAGSTSGYLHCWDLRTMKQLWETRASSNVIYSVQHMHND 537
           RSTDS+ GIR+LCFNP S LVF+GST+GY  CWDLRTM+ LWE R S NVIYS+QH+ +D
Sbjct: 260 RSTDSTGGIRTLCFNPRSHLVFSGSTAGYASCWDLRTMRPLWENRISPNVIYSMQHLCSD 319

Query: 538 TSSLV 552
           T +LV
Sbjct: 320 THTLV 324


>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  264 bits (675), Expect = 6e-69
 Identities = 129/197 (65%), Positives = 149/197 (75%), Gaps = 13/197 (6%)
 Frame = +1

Query: 1   PDMVPLADFDFDESK-------------VVGLVGTRICIWRRHGKRSIFPLHEDTVTSGL 141
           PD VPL DFDFDESK             +VGLVGTRICIWRR+G+RSIFP  E     G 
Sbjct: 153 PDGVPLVDFDFDESKAVVPYIDIVHRIVIVGLVGTRICIWRRNGQRSIFPSREGQFMKGS 212

Query: 142 CMRYIDPEAVVGCGDGTARVFDMYSKKCSRIIRMHGGPVTCLALTDDQXXXXXXXXXXXK 321
           CMRY DPEAVVGC DGTARVFDMYSKKCSRI+RMH  PVTCL+L++DQ            
Sbjct: 213 CMRYFDPEAVVGCEDGTARVFDMYSKKCSRIVRMHTEPVTCLSLSEDQLIISGSSLGRIT 272

Query: 322 VAGLSSDQRVASLRSTDSSGIRSLCFNPCSSLVFAGSTSGYLHCWDLRTMKQLWETRASS 501
           ++GLSSDQRVA+LR TDS+GI+SLCFNP S  VFAG+T+GY  CWDLRTM+QLW+TR S 
Sbjct: 273 ISGLSSDQRVATLRPTDSTGIKSLCFNPVSHQVFAGTTAGYASCWDLRTMRQLWKTRVSP 332

Query: 502 NVIYSVQHMHNDTSSLV 552
           NV+YS+QHM +DTS+LV
Sbjct: 333 NVVYSLQHMRSDTSTLV 349


>emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]
          Length = 471

 Score =  251 bits (640), Expect = 7e-65
 Identities = 128/220 (58%), Positives = 148/220 (67%), Gaps = 36/220 (16%)
 Frame = +1

Query: 1   PDMVPLADFDFDESKVVGLVGTRICIWRRHGKRSIFPLHEDTVTSGLCMR---------- 150
           P++ PL DFDFDE+K+VGL+GTRIC WRR+GKRSIFP  E T   GLCMR          
Sbjct: 155 PNLAPLVDFDFDENKIVGLIGTRICXWRRNGKRSIFPSXEGTFMKGLCMRNAVVXSVSEN 214

Query: 151 -------------------------YIDPEAVVGCGDGTARVFDMYSKKCSRIIRMHGGP 255
                                    YIDPEAVVGC DGTARVFDMYS+KCSRIIRMH GP
Sbjct: 215 GVWSLGEWEGHTVLGSCIEMVVVRCYIDPEAVVGCEDGTARVFDMYSRKCSRIIRMHSGP 274

Query: 256 VTCLALTDDQXXXXXXXXXXXKVAGLSSDQRVASLRSTDSS-GIRSLCFNPCSSLVFAGS 432
           V CLAL+DDQ            ++GLSSDQR+A LRSTDS+ GIR+LCFNP S LVF+GS
Sbjct: 275 VRCLALSDDQCIISGSSLGSITISGLSSDQRIAKLRSTDSTGGIRTLCFNPRSHLVFSGS 334

Query: 433 TSGYLHCWDLRTMKQLWETRASSNVIYSVQHMHNDTSSLV 552
           T+GY  CWDLRTM+ LWE R S N IYS+QH+ +DT +LV
Sbjct: 335 TAGYASCWDLRTMRPLWENRISPNXIYSMQHLCSDTHTLV 374


>ref|XP_003538059.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Glycine max]
          Length = 444

 Score =  246 bits (627), Expect = 2e-63
 Identities = 115/183 (62%), Positives = 137/183 (74%)
 Frame = +1

Query: 1   PDMVPLADFDFDESKVVGLVGTRICIWRRHGKRSIFPLHEDTVTSGLCMRYIDPEAVVGC 180
           PDM  L DFDFDESK+VGL+G+ +CIWRR+GKRSIFP  E     G CMRY DPEAVVGC
Sbjct: 165 PDMFSLVDFDFDESKIVGLIGSHLCIWRRNGKRSIFPSLEGKFVKGSCMRYFDPEAVVGC 224

Query: 181 GDGTARVFDMYSKKCSRIIRMHGGPVTCLALTDDQXXXXXXXXXXXKVAGLSSDQRVASL 360
            DG  RVFDMYS+KCS+IIRMH  P+TCL L++DQ            ++  SS Q+VA+L
Sbjct: 225 DDGAVRVFDMYSRKCSQIIRMHYAPITCLCLSEDQLIMSGSTSGSITMSDPSSVQQVATL 284

Query: 361 RSTDSSGIRSLCFNPCSSLVFAGSTSGYLHCWDLRTMKQLWETRASSNVIYSVQHMHNDT 540
           RS+D+ GIR+LCFNP S L+FAGS  GY +CWDLRT K LW  R S NVIYS+QHMH+DT
Sbjct: 285 RSSDARGIRTLCFNPSSQLLFAGSAVGYAYCWDLRTRKLLWSNRVSPNVIYSLQHMHSDT 344

Query: 541 SSL 549
           S+L
Sbjct: 345 STL 347