BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029910
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis ...    73   2e-11
emb|CAN70347.1| hypothetical protein VITISV_012579 [Vitis vinifera]    73   2e-11
ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [V...    68   7e-10
ref|XP_004171056.1| PREDICTED: transcription factor RF2b-like, p...    68   9e-10
ref|XP_004146436.1| PREDICTED: transcription factor RF2b-like [C...    68   9e-10

>ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis vinifera]
          Length = 359

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 12/76 (15%)
 Frame = +1

Query: 91  MQDQTNPQN-SNAENG---------NSSTSYKG--HRRAHSEVNFRLPDDLDISTDPFDV 234
           MQD +NP   S++ N          N++TS +G  HRRAHSEVNFR+P+DL + +DPFDV
Sbjct: 1   MQDPSNPNPISHSHNAHQPPSTSFPNTATSLRGGHHRRAHSEVNFRIPEDLHLVSDPFDV 60

Query: 235 STTTSFEEMGSEDDLF 282
             + SFEEMGSEDDLF
Sbjct: 61  -PSASFEEMGSEDDLF 75


>emb|CAN70347.1| hypothetical protein VITISV_012579 [Vitis vinifera]
          Length = 412

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 12/76 (15%)
 Frame = +1

Query: 91  MQDQTNPQN-SNAENG---------NSSTSYKG--HRRAHSEVNFRLPDDLDISTDPFDV 234
           MQD +NP   S++ N          N++TS +G  HRRAHSEVNFR+P+DL + +DPFDV
Sbjct: 1   MQDPSNPNPISHSHNAHQPPSTSFPNTATSLRGGHHRRAHSEVNFRIPEDLHLVSDPFDV 60

Query: 235 STTTSFEEMGSEDDLF 282
             + SFEEMGSEDDLF
Sbjct: 61  -PSASFEEMGSEDDLF 75


>ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [Vitis vinifera]
          Length = 344

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 9/75 (12%)
 Frame = +1

Query: 88  KMQDQTN----PQNSNAEN--GNSSTSYKG--HRRAHSEVNFRLPDDLDI-STDPFDVST 240
           KMQD ++    P+NS      GN +TS++G  HRRAHSE+ FR+PDD+D+ S+DPF+ S 
Sbjct: 2   KMQDPSSSHNAPKNSTPATMYGNPATSFRGPHHRRAHSELTFRMPDDVDLSSSDPFNAS- 60

Query: 241 TTSFEEMGSEDDLFS 285
             S EE+ SEDDLFS
Sbjct: 61  AASLEEIASEDDLFS 75


>ref|XP_004171056.1| PREDICTED: transcription factor RF2b-like, partial [Cucumis
           sativus]
          Length = 190

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
 Frame = +1

Query: 106 NPQNSNAENGNSSTSYKG--HRRAHSEVNFRLPDDLDISTDPFDVSTTTSFEEMGSEDDL 279
           NP N  A + N +  ++G  HRRAHSEV+FR+PDDLD+ +DPFD + ++ FE++G EDDL
Sbjct: 5   NPTNPMASSSNPTPPFRGSFHRRAHSEVHFRIPDDLDLVSDPFD-APSSGFEDLGFEDDL 63


>ref|XP_004146436.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus]
          Length = 344

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/60 (53%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
 Frame = +1

Query: 106 NPQNSNAENGNSSTSYKG--HRRAHSEVNFRLPDDLDISTDPFDVSTTTSFEEMGSEDDL 279
           NP N  A + N +  ++G  HRRAHSEV+FR+PDDLD+ +DPFD + ++ FE++G EDDL
Sbjct: 5   NPTNPMASSSNPTPPFRGSFHRRAHSEVHFRIPDDLDLVSDPFD-APSSGFEDLGFEDDL 63