BLASTX nr result

ID: Coptis24_contig00029908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029908
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276206.1| PREDICTED: UPF0497 membrane protein 4 [Vitis...    82   3e-14
ref|XP_004150813.1| PREDICTED: CASP-like protein 6-like [Cucumis...    77   1e-12
ref|NP_001236009.1| CASP-like protein 5 [Glycine max] gi|2885591...    75   4e-12
ref|NP_001239666.1| CASP-like protein 6 [Glycine max] gi|2885591...    70   2e-10
ref|XP_003593986.1| hypothetical protein MTR_2g020060 [Medicago ...    68   9e-10

>ref|XP_002276206.1| PREDICTED: UPF0497 membrane protein 4 [Vitis vinifera]
           gi|226713609|sp|A7NW78.1|CSPL5_VITVI RecName:
           Full=CASP-like protein VIT_05s0020g01820
          Length = 195

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/98 (41%), Positives = 62/98 (63%)
 Frame = +1

Query: 43  ILSFLAIITSLVVIIVLAVSKQTKSIGYYQDAYLPPILIVATARWQYLSGLVFLMVSNVI 222
           +L  +A+  +LV  ++L V KQTK +       LPP+ +  TA+W+YLS  V+ +VSN I
Sbjct: 33  VLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSAFVYFVVSNAI 92

Query: 223 AFVYATISLSISLAYQTGQKGFGLTLIVLDLMIMALWF 336
           A  YA +SL +S+    G KG GL + V+DL+++AL F
Sbjct: 93  ACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLF 130


>ref|XP_004150813.1| PREDICTED: CASP-like protein 6-like [Cucumis sativus]
          Length = 195

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
 Frame = +1

Query: 43  ILSFLAIITSLVVIIVLAVSKQTKSIGYYQDAYLPPILIVATARWQYLSGLVFLMVSNVI 222
           I+ F+A+I +L   +V+ V KQTK +       LPP+ +  TARW YLS LV+ +V+N I
Sbjct: 31  IVRFVAMILTLAAAVVIGVDKQTKMVPLQLATSLPPVHVPVTARWHYLSALVYFVVANAI 90

Query: 223 AFVYATISLSISLAYQTGQKGF-GLTLIVLDLMIMALWF 336
           A  YA  SL +SL  +   +GF    +IV+D++ +AL F
Sbjct: 91  ACSYAAFSLVLSLLNKDKSRGFMRSAIIVMDILTVALLF 129


>ref|NP_001236009.1| CASP-like protein 5 [Glycine max]
           gi|288559186|sp|C6SZP8.1|CSPL5_SOYBN RecName:
           Full=CASP-like protein 5 gi|255628753|gb|ACU14721.1|
           unknown [Glycine max]
          Length = 187

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/110 (37%), Positives = 61/110 (55%)
 Frame = +1

Query: 7   VANPSTADKTIFILSFLAIITSLVVIIVLAVSKQTKSIGYYQDAYLPPILIVATARWQYL 186
           VA P     +  +L  LA   +LV  IV+AV KQTK +       LPP+ +  TA+W  +
Sbjct: 13  VAKPVAVGVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQM 72

Query: 187 SGLVFLMVSNVIAFVYATISLSISLAYQTGQKGFGLTLIVLDLMIMALWF 336
           S +V+ +V+N IA  YA +SL ++L  +   KG    + VLD  ++AL F
Sbjct: 73  SAIVYFLVTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLF 122


>ref|NP_001239666.1| CASP-like protein 6 [Glycine max]
           gi|288559192|sp|C6TBD0.1|CSPL6_SOYBN RecName:
           Full=CASP-like protein 6 gi|255637615|gb|ACU19132.1|
           unknown [Glycine max]
          Length = 188

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/98 (37%), Positives = 55/98 (56%)
 Frame = +1

Query: 43  ILSFLAIITSLVVIIVLAVSKQTKSIGYYQDAYLPPILIVATARWQYLSGLVFLMVSNVI 222
           +L  LA   +LV  IV+AV KQTK +        PP+ +  TA+W  +S  V+ +V+N I
Sbjct: 26  LLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFLVTNAI 85

Query: 223 AFVYATISLSISLAYQTGQKGFGLTLIVLDLMIMALWF 336
           A  YA +SL ++L  +   KG    + VLD  ++AL F
Sbjct: 86  ACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLF 123


>ref|XP_003593986.1| hypothetical protein MTR_2g020060 [Medicago truncatula]
           gi|355483034|gb|AES64237.1| hypothetical protein
           MTR_2g020060 [Medicago truncatula]
           gi|388490648|gb|AFK33390.1| unknown [Medicago
           truncatula]
          Length = 189

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/98 (36%), Positives = 56/98 (57%)
 Frame = +1

Query: 43  ILSFLAIITSLVVIIVLAVSKQTKSIGYYQDAYLPPILIVATARWQYLSGLVFLMVSNVI 222
           +L   A++ +L   +VL   KQT  +       LPP+ +  TA+WQY+S  V+ +V+N I
Sbjct: 26  VLRLCALVLTLTAAVVLVADKQTTVVPVKISDSLPPLDVPVTAKWQYVSAYVYFVVANFI 85

Query: 223 AFVYATISLSISLAYQTGQKGFGLTLIVLDLMIMALWF 336
           AF YAT+S  I+LA     K     + +LD +++AL F
Sbjct: 86  AFAYATLSFVIALANGHKSKLLVTLVTLLDAIMVALLF 123


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