BLASTX nr result
ID: Coptis24_contig00029904
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029904 (403 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531110.1| conserved hypothetical protein [Ricinus comm... 128 4e-28 emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera] 125 5e-27 ref|XP_003597323.1| RING finger family protein [Medicago truncat... 105 5e-21 ref|XP_003606612.1| hypothetical protein MTR_4g063070 [Medicago ... 99 4e-19 ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group] g... 90 2e-16 >ref|XP_002531110.1| conserved hypothetical protein [Ricinus communis] gi|223529306|gb|EEF31275.1| conserved hypothetical protein [Ricinus communis] Length = 199 Score = 128 bits (322), Expect = 4e-28 Identities = 57/118 (48%), Positives = 83/118 (70%) Frame = -1 Query: 403 LYCLPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHS 224 ++ LP Q++ + + E + +C VCLG +EEG+WL+ LPNC H FH++CIDTWFQ+HS Sbjct: 69 MHSLPITQFKNKKEEEPRVSNNECAVCLGEYEEGEWLKHLPNCAHVFHVACIDTWFQTHS 128 Query: 223 NCPLCRSHIIYNLTDNHGYSVSMLTLLDTLRREDAIGETASSYQVVHKQSVQNSAAGP 50 NCPLCRSH +Y+L +H YS+S+ LL+T RRED E++ YQ++ + + NS P Sbjct: 129 NCPLCRSH-VYDL--SHEYSMSINILLETPRREDFFHESSEDYQILRAEILCNSMFRP 183 >emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera] Length = 209 Score = 125 bits (313), Expect = 5e-27 Identities = 58/98 (59%), Positives = 73/98 (74%) Frame = -1 Query: 403 LYCLPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHS 224 +Y LP Q++K H +TDC VCLG FEEG++L+ LPNC+H FHI CIDTWF+SHS Sbjct: 39 VYSLPIAQFKKNEGPS--HSNTDCAVCLGEFEEGEFLKHLPNCSHVFHIPCIDTWFESHS 96 Query: 223 NCPLCRSHIIYNLTDNHGYSVSMLTLLDTLRREDAIGE 110 NCPLCRSH +Y+ T ++ +S SM TLL+TLRRED E Sbjct: 97 NCPLCRSH-VYDFTMDNEFSGSMYTLLETLRREDFFQE 133 >ref|XP_003597323.1| RING finger family protein [Medicago truncatula] gi|355486371|gb|AES67574.1| RING finger family protein [Medicago truncatula] Length = 219 Score = 105 bits (261), Expect = 5e-21 Identities = 48/101 (47%), Positives = 65/101 (64%) Frame = -1 Query: 394 LPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHSNCP 215 LP Q++K E+ ++ DC +CLG FE G+ L+ LPNC H FH+SCID WFQ HS+CP Sbjct: 116 LPMYQFKKNEAQEMT-INVDCAICLGEFEGGELLKLLPNCNHGFHVSCIDKWFQLHSSCP 174 Query: 214 LCRSHIIYNLTDNHGYSVSMLTLLDTLRREDAIGETASSYQ 92 LCRS + L N+ YSVS+ T L+ L +D E + +Q Sbjct: 175 LCRSRVYRVLVANNEYSVSLNTWLEILGMDDITPERNAHFQ 215 >ref|XP_003606612.1| hypothetical protein MTR_4g063070 [Medicago truncatula] gi|355507667|gb|AES88809.1| hypothetical protein MTR_4g063070 [Medicago truncatula] Length = 396 Score = 99.0 bits (245), Expect = 4e-19 Identities = 40/67 (59%), Positives = 51/67 (76%) Frame = -1 Query: 394 LPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHSNCP 215 LP Q++K ++ E D DC +CLG FEEG+W++ LP CTH FH+SCID WFQSHSNCP Sbjct: 317 LPMFQFKK-NEVEQKLSDVDCAICLGEFEEGEWVKHLPICTHSFHVSCIDKWFQSHSNCP 375 Query: 214 LCRSHII 194 LCR H++ Sbjct: 376 LCRCHVL 382 >ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group] gi|41052984|dbj|BAD07893.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica Group] gi|41053267|dbj|BAD07693.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica Group] gi|113537327|dbj|BAF09710.1| Os02g0692000 [Oryza sativa Japonica Group] gi|215697950|dbj|BAG92134.1| unnamed protein product [Oryza sativa Japonica Group] Length = 389 Score = 90.1 bits (222), Expect = 2e-16 Identities = 39/66 (59%), Positives = 48/66 (72%) Frame = -1 Query: 388 TIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHSNCPLC 209 T+ +R DG VD TDC+VCLG F EG+ LR LP C+H FH+ CIDTW +SHSNCPLC Sbjct: 148 TVCKYRRGDGFVD--STDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLC 205 Query: 208 RSHIIY 191 R +I + Sbjct: 206 RCNIAF 211