BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029904
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531110.1| conserved hypothetical protein [Ricinus comm...   128   4e-28
emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]   125   5e-27
ref|XP_003597323.1| RING finger family protein [Medicago truncat...   105   5e-21
ref|XP_003606612.1| hypothetical protein MTR_4g063070 [Medicago ...    99   4e-19
ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group] g...    90   2e-16

>ref|XP_002531110.1| conserved hypothetical protein [Ricinus communis]
           gi|223529306|gb|EEF31275.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  128 bits (322), Expect = 4e-28
 Identities = 57/118 (48%), Positives = 83/118 (70%)
 Frame = -1

Query: 403 LYCLPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHS 224
           ++ LP  Q++ + + E    + +C VCLG +EEG+WL+ LPNC H FH++CIDTWFQ+HS
Sbjct: 69  MHSLPITQFKNKKEEEPRVSNNECAVCLGEYEEGEWLKHLPNCAHVFHVACIDTWFQTHS 128

Query: 223 NCPLCRSHIIYNLTDNHGYSVSMLTLLDTLRREDAIGETASSYQVVHKQSVQNSAAGP 50
           NCPLCRSH +Y+L  +H YS+S+  LL+T RRED   E++  YQ++  + + NS   P
Sbjct: 129 NCPLCRSH-VYDL--SHEYSMSINILLETPRREDFFHESSEDYQILRAEILCNSMFRP 183


>emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]
          Length = 209

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/98 (59%), Positives = 73/98 (74%)
 Frame = -1

Query: 403 LYCLPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHS 224
           +Y LP  Q++K       H +TDC VCLG FEEG++L+ LPNC+H FHI CIDTWF+SHS
Sbjct: 39  VYSLPIAQFKKNEGPS--HSNTDCAVCLGEFEEGEFLKHLPNCSHVFHIPCIDTWFESHS 96

Query: 223 NCPLCRSHIIYNLTDNHGYSVSMLTLLDTLRREDAIGE 110
           NCPLCRSH +Y+ T ++ +S SM TLL+TLRRED   E
Sbjct: 97  NCPLCRSH-VYDFTMDNEFSGSMYTLLETLRREDFFQE 133


>ref|XP_003597323.1| RING finger family protein [Medicago truncatula]
           gi|355486371|gb|AES67574.1| RING finger family protein
           [Medicago truncatula]
          Length = 219

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/101 (47%), Positives = 65/101 (64%)
 Frame = -1

Query: 394 LPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHSNCP 215
           LP  Q++K    E+  ++ DC +CLG FE G+ L+ LPNC H FH+SCID WFQ HS+CP
Sbjct: 116 LPMYQFKKNEAQEMT-INVDCAICLGEFEGGELLKLLPNCNHGFHVSCIDKWFQLHSSCP 174

Query: 214 LCRSHIIYNLTDNHGYSVSMLTLLDTLRREDAIGETASSYQ 92
           LCRS +   L  N+ YSVS+ T L+ L  +D   E  + +Q
Sbjct: 175 LCRSRVYRVLVANNEYSVSLNTWLEILGMDDITPERNAHFQ 215


>ref|XP_003606612.1| hypothetical protein MTR_4g063070 [Medicago truncatula]
           gi|355507667|gb|AES88809.1| hypothetical protein
           MTR_4g063070 [Medicago truncatula]
          Length = 396

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = -1

Query: 394 LPTIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHSNCP 215
           LP  Q++K ++ E    D DC +CLG FEEG+W++ LP CTH FH+SCID WFQSHSNCP
Sbjct: 317 LPMFQFKK-NEVEQKLSDVDCAICLGEFEEGEWVKHLPICTHSFHVSCIDKWFQSHSNCP 375

Query: 214 LCRSHII 194
           LCR H++
Sbjct: 376 LCRCHVL 382


>ref|NP_001047796.1| Os02g0692000 [Oryza sativa Japonica Group]
           gi|41052984|dbj|BAD07893.1| zinc finger (C3HC4-type RING
           finger)-like [Oryza sativa Japonica Group]
           gi|41053267|dbj|BAD07693.1| zinc finger (C3HC4-type RING
           finger)-like [Oryza sativa Japonica Group]
           gi|113537327|dbj|BAF09710.1| Os02g0692000 [Oryza sativa
           Japonica Group] gi|215697950|dbj|BAG92134.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 389

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = -1

Query: 388 TIQYRKRSDGEVDHVDTDCTVCLGAFEEGDWLRFLPNCTHWFHISCIDTWFQSHSNCPLC 209
           T+   +R DG VD   TDC+VCLG F EG+ LR LP C+H FH+ CIDTW +SHSNCPLC
Sbjct: 148 TVCKYRRGDGFVD--STDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLC 205

Query: 208 RSHIIY 191
           R +I +
Sbjct: 206 RCNIAF 211