BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029898
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    72   5e-11
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    72   6e-11
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    71   1e-10
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    70   2e-10
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]            69   3e-10

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = -1

Query: 234 TKRGNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTR 55
           T +GN K ++DV YVP L  NLLSVGQL+   YS+ F DN C I DK+   TIA V MT+
Sbjct: 359 TVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQ 418

Query: 54  NKVFSLLMS 28
           NK+F L +S
Sbjct: 419 NKMFPLDIS 427


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/72 (54%), Positives = 47/72 (65%)
 Frame = -1

Query: 225 GNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKV 46
           GN KL+++V ++P LTQNLLSVGQL+   YSI FD   C I DKK    I NV M  NK+
Sbjct: 357 GNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKL 416

Query: 45  FSLLMSLREKVA 10
           F L +S  EK A
Sbjct: 417 FPLEVSSIEKHA 428


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/72 (52%), Positives = 47/72 (65%)
 Frame = -1

Query: 225 GNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKV 46
           GN KL+++V ++P LTQNLLSVGQL+   YSI FD   C I DKK    I +V M  NK+
Sbjct: 342 GNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKL 401

Query: 45  FSLLMSLREKVA 10
           F L +S  EK A
Sbjct: 402 FPLEVSSIEKHA 413


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/72 (52%), Positives = 48/72 (66%)
 Frame = -1

Query: 225 GNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKV 46
           GN KL+++V ++P LTQNLLSVGQL+   YSI FD + C I DKK    I +V M  NK+
Sbjct: 343 GNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKL 402

Query: 45  FSLLMSLREKVA 10
           F L +S  EK A
Sbjct: 403 FPLEVSSIEKHA 414


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/72 (44%), Positives = 49/72 (68%)
 Frame = -1

Query: 216 KLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKVFSL 37
           K I DVL VP L QNLLS+GQLL+  Y+++F+D  C I+D+K    +A +NM +N+ F L
Sbjct: 386 KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLL 445

Query: 36  LMSLREKVAFKT 1
            M+   ++A ++
Sbjct: 446 RMNHTTQMALRS 457