BLASTX nr result
ID: Coptis24_contig00029898
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029898 (237 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 72 5e-11 emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 72 6e-11 emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 71 1e-10 emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] 70 2e-10 emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] 69 3e-10 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 72.0 bits (175), Expect = 5e-11 Identities = 38/69 (55%), Positives = 47/69 (68%) Frame = -1 Query: 234 TKRGNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTR 55 T +GN K ++DV YVP L NLLSVGQL+ YS+ F DN C I DK+ TIA V MT+ Sbjct: 359 TVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQ 418 Query: 54 NKVFSLLMS 28 NK+F L +S Sbjct: 419 NKMFPLDIS 427 >emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] Length = 1274 Score = 71.6 bits (174), Expect = 6e-11 Identities = 39/72 (54%), Positives = 47/72 (65%) Frame = -1 Query: 225 GNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKV 46 GN KL+++V ++P LTQNLLSVGQL+ YSI FD C I DKK I NV M NK+ Sbjct: 357 GNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAANKL 416 Query: 45 FSLLMSLREKVA 10 F L +S EK A Sbjct: 417 FPLEVSSIEKHA 428 >emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] Length = 1472 Score = 70.9 bits (172), Expect = 1e-10 Identities = 38/72 (52%), Positives = 47/72 (65%) Frame = -1 Query: 225 GNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKV 46 GN KL+++V ++P LTQNLLSVGQL+ YSI FD C I DKK I +V M NK+ Sbjct: 342 GNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAANKL 401 Query: 45 FSLLMSLREKVA 10 F L +S EK A Sbjct: 402 FPLEVSSIEKHA 413 >emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera] Length = 1109 Score = 69.7 bits (169), Expect = 2e-10 Identities = 38/72 (52%), Positives = 48/72 (66%) Frame = -1 Query: 225 GNRKLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKV 46 GN KL+++V ++P LTQNLLSVGQL+ YSI FD + C I DKK I +V M NK+ Sbjct: 343 GNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAANKL 402 Query: 45 FSLLMSLREKVA 10 F L +S EK A Sbjct: 403 FPLEVSSIEKHA 414 >emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group] Length = 1314 Score = 69.3 bits (168), Expect = 3e-10 Identities = 32/72 (44%), Positives = 49/72 (68%) Frame = -1 Query: 216 KLIHDVLYVPGLTQNLLSVGQLLQRDYSIFFDDNKCHIIDKKKIFTIANVNMTRNKVFSL 37 K I DVL VP L QNLLS+GQLL+ Y+++F+D C I+D+K +A +NM +N+ F L Sbjct: 386 KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKNRNFLL 445 Query: 36 LMSLREKVAFKT 1 M+ ++A ++ Sbjct: 446 RMNHTTQMALRS 457