BLASTX nr result

ID: Coptis24_contig00029894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029894
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267577.2| PREDICTED: auxin-induced protein 5NG4-like [...   105   3e-21
ref|XP_003633216.1| PREDICTED: auxin-induced protein 5NG4-like [...   100   1e-19
emb|CBI18201.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002266148.1| PREDICTED: auxin-induced protein 5NG4 [Vitis...    88   8e-16
ref|XP_002518959.1| Auxin-induced protein 5NG4, putative [Ricinu...    87   1e-15

>ref|XP_002267577.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 345

 Score =  105 bits (263), Expect = 3e-21
 Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 7/175 (4%)
 Frame = -3

Query: 504 LRGIGKLLGTLISLSGAFTLIFWPTETTY-SIISVSQNTA----IGYIMVTLGIFAYSTW 340
           + G  K+ G  ISL GA  L+ W       +++S+S +T     +G+IM  +G+ A S W
Sbjct: 137 INGQAKIWGLGISLGGALALVLWKGPVVVKAMLSISFDTTSDSVLGWIMTIVGVLATSFW 196

Query: 339 VIFLRPVATRYPAILSITAMATFFAALQTSVIAAFLCRNISNWKLKWD--LELLDIFLGG 166
            I +R V   YPA +S+TAM +FF  +QT+++AAF+  + S W+L+WD  L L+ + LGG
Sbjct: 197 NILVRHVIQIYPAEISLTAMMSFFGTIQTAIVAAFVVSS-SAWELQWDGGLILITLLLGG 255

Query: 165 VLNCGLGSYAYIWSARKKGXXXXXXXXXXXXXXXAVLQWVILGNSMNVGSTVGSV 1
           ++  GL  Y   WS   KG                +L   +LG+S ++GS VG+V
Sbjct: 256 IVVTGLSYYVMTWSIGIKGPVFSASFNPLLVLFSFLLNTFVLGSSAHLGSIVGAV 310


>ref|XP_003633216.1| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
          Length = 247

 Score =  100 bits (250), Expect = 1e-19
 Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 7/175 (4%)
 Frame = -3

Query: 504 LRGIGKLLGTLISLSGAFTLIFWPTETTY-SIISVS----QNTAIGYIMVTLGIFAYSTW 340
           + G  K+ G  ISL GA  L+ W       +++S+S     ++ +G+I+  +G+ A S W
Sbjct: 39  INGQAKIWGLGISLGGALALVLWKGPVVVKAMLSISFDATGDSVLGWILTIVGVIATSFW 98

Query: 339 VIFLRPVATRYPAILSITAMATFFAALQTSVIAAFLCRNISNWKLKWD--LELLDIFLGG 166
            I +R V   YPA +S+TAM +FF  +QT+++AAF+  + S W+L+WD  L L  + LGG
Sbjct: 99  NILVRHVIQIYPAEISLTAMMSFFGTIQTAIVAAFVVSS-SAWELQWDGGLVLTTLLLGG 157

Query: 165 VLNCGLGSYAYIWSARKKGXXXXXXXXXXXXXXXAVLQWVILGNSMNVGSTVGSV 1
           +   GL  Y   WS   KG                +L   +LG+S ++GS VG++
Sbjct: 158 IAVTGLSYYVMTWSIGIKGPVFSTSFNPLLVLFSFLLNTFVLGSSAHLGSIVGAM 212


>emb|CBI18201.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 16/146 (10%)
 Frame = -3

Query: 498 GIGKLLGTLISLSGAFTLIF----------WPTETTYSII--SVSQNTA----IGYIMVT 367
           GI K+LG+++ +SGA    F          W  E    I   SV QN+      G +M+ 
Sbjct: 131 GIAKVLGSVVGVSGAMVFAFVKGPPLKFMDWYPEIKKGISDSSVEQNSKGEWIKGSLMML 190

Query: 366 LGIFAYSTWVIFLRPVATRYPAILSITAMATFFAALQTSVIAAFLCRNISNWKLKWDLEL 187
               A+S W+I   P+  +YPA L +T +  FF+ +Q+ V+AA + RN S+WKL WDL L
Sbjct: 191 AANTAWSLWLILQGPIIKQYPAKLRLTTLQCFFSCIQSVVLAAVVERNPSSWKLAWDLNL 250

Query: 186 LDIFLGGVLNCGLGSYAYIWSARKKG 109
           L I   G++  G+  +  +W+  KKG
Sbjct: 251 LSIAYCGIVVTGITYWLQVWTIEKKG 276


>ref|XP_002266148.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
           gi|147788033|emb|CAN73719.1| hypothetical protein
           VITISV_041298 [Vitis vinifera]
          Length = 361

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 16/146 (10%)
 Frame = -3

Query: 498 GIGKLLGTLISLSGAFTLIF----------WPTETTYSII--SVSQNTA----IGYIMVT 367
           GI K+LG+++ +SGA    F          W  E    I   SV QN+      G +M+ 
Sbjct: 139 GIAKVLGSVVGVSGAMVFAFVKGPPLKFMDWYPEIKKGISDSSVEQNSKGEWIKGSLMML 198

Query: 366 LGIFAYSTWVIFLRPVATRYPAILSITAMATFFAALQTSVIAAFLCRNISNWKLKWDLEL 187
               A+S W+I   P+  +YPA L +T +  FF+ +Q+ V+AA + RN S+WKL WDL L
Sbjct: 199 AANTAWSLWLILQGPIIKQYPAKLRLTTLQCFFSCIQSVVLAAVVERNPSSWKLAWDLNL 258

Query: 186 LDIFLGGVLNCGLGSYAYIWSARKKG 109
           L I   G++  G+  +  +W+  KKG
Sbjct: 259 LSIAYCGIVVTGITYWLQVWTIEKKG 284


>ref|XP_002518959.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223541946|gb|EEF43492.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 372

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
 Frame = -3

Query: 501 RGIGKLLGTLISLSGAFTLIFWPTETTYS------IISV------------SQNTAIGYI 376
           RG  K+ GT+I + G+    FW     Y       +IS+             +N   G  
Sbjct: 128 RGWAKVFGTVICIGGSLVFTFWKGGYLYKSLEERPLISIYSSRGHNELRHAKENWIKGSA 187

Query: 375 MVTLGIFAYSTWVIFLRPVATRYPAILSITAMATFFAALQTSVIAAFLCRNISNWKLKWD 196
           ++     A+S W+I    V   YPA LS+T +  FFA++Q+SV+A F  RN + WKL W+
Sbjct: 188 LILTSHIAWSAWLILQAVVYKVYPARLSLTTLICFFASIQSSVLALFFGRNPTLWKLDWN 247

Query: 195 LELLDIFLGGVLNCGLGSYAYIWSARKKGXXXXXXXXXXXXXXXAVLQWVILGNSMNVGS 16
           ++LL I   GV+   L  Y   W   KKG                +   +     ++VGS
Sbjct: 248 VQLLTIIYCGVVISALVYYLQTWCISKKGPVFAAMFSPLLLIIVGIFSAIAFAERLHVGS 307

Query: 15  TVGSV 1
             G+V
Sbjct: 308 LTGAV 312


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